Transcript Information: R_Transcript_52152.p1


Annotated TAIR IDAT4G18975.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10392170-10393665 | Reverse length=287
E-Value1.7E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4228328467203
Replicate 22.8264250560401
Replicate 34.1408333346891
Condition 2: 8 Hour
Replicate 13.2961741275138
Replicate 24.1281628014497
Replicate 33.9095776720833
Condition 3: 24 Hour
Replicate 13.796868118428
Replicate 24.1565680216857
Replicate 32.5255043869497


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52152.p1 GENE.R_Transcript_52152~~R_Transcript_52152.p1 ORF type:complete len:260 (+),score=57.82 R_Transcript_52152:193-972(+)
ATGGCGCTTAATTCTTTCTGCTACGACCCTCAGATTTTTCAATATCAGATTCAAATTCCTCGAAGCAGGAAGTTTCTTGTGCATAAGCCCTCGCAAATGCGTGTCACTGCTATCCAGAGCTCATCGGGTCATACTCTACCGCGTCCTTCTGCTTCTGGTGCAGTTGAAAGGACATCCAAAAATATAGTCAAGAAGTCAGGGAAGAGAGAACATCATCTATGGAAATGCAGAGATTCTGCTGGTTCTGGTCAAAAGGCCATGAATTTAGTTCAAATTGTTTCTGGACTTCCGAATGAGAAAGAGGCAGTTTATAGGGCATTAGATGAATGGACTGCCTGGGAGCTGGAGTTCCCATTAATTGCAGCAGCTAAGGCTCTAAGAATCTTAAGAAACAGAAAGCAATGGTTGCGGGTGATTCAAGTTGCTAAGTGGATGTTGAGCAAGGGCCAAGGGACAACCATGGCAACATATGACACACTTCTATTGGCATTTGACCATGAGGCAAGGATTGATGAAGCTGGGTCTCTTTGGAACATGATCTTGCATACTCATACACGTTCTATTTCAAGGCAATTATTCTCTCGGATGATTTCATTGTGTGATCATCATGATATGAAGGAGAAAATAGTAGAGGTTTTTGCAGACATGGAAGAATTAGGTGTGAAACCAGATGAAGATACAGTCAGGAGGGTGGCACGTGCATTTGAGAGACTTGATCAAGAAGACAAGATGGTTGTAAATGGAAGTATATTCATTTTAAAGGTGAAAGGGTCAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52152.p1 GENE.R_Transcript_52152~~R_Transcript_52152.p1 ORF type:complete len:260 (+),score=57.82 R_Transcript_52152:193-972(+)
MALNSFCYDPQIFQYQIQIPRSRKFLVHKPSQMRVTAIQSSSGHTLPRPSASGAVERTSKNIVKKSGKREHHLWKCRDSAGSGQKAMNLVQIVSGLPNEKEAVYRALDEWTAWELEFPLIAAAKALRILRNRKQWLRVIQVAKWMLSKGQGTTMATYDTLLLAFDHEARIDEAGSLWNMILHTHTRSISRQLFSRMISLCDHHDMKEKIVEVFADMEELGVKPDEDTVRRVARAFERLDQEDKMVVNGSIFILKVKGSK*

Click here to download the sequence:
Link to NCBI Protein BLAST