Transcript Information: R_Transcript_52181.p1


Annotated TAIR IDAT1G79150.1
Annotated Gene Namebinding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29772716-29777874 | Reverse length=830
E-Value1.6E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.70874238165
Replicate 220.097528935933
Replicate 319.039012579917
Condition 2: 8 Hour
Replicate 116.799457877004
Replicate 217.362254271456
Replicate 318.734361496428
Condition 3: 24 Hour
Replicate 122.794017877685
Replicate 220.4817564727
Replicate 319.571407758082


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52181.p1 GENE.R_Transcript_52181~~R_Transcript_52181.p1 ORF type:complete len:841 (+),score=205.13,NOC3p|PF07540.7|1.6e+04,NOC3p|PF07540.7|3.9e-25,NOC3p|PF07540.7|1.6e+04,CBF|PF03914.13|1.4e+02,CBF|PF03914.13|9.5e-23 R_Transcript_52181:236-2758(+)
ATGGGGAAGAAACAGAAGCAAAAAGAGAAGGTAGTACTTCCACCGGAGCTTCCACCTGAGGTCCCAGATGAGGAAATTGAAGTCTCAGATGAAGATGTCAAGTTTGTCACCAAGAATCGTGCCTATGCTGGTTTTGTTTCTCGTTTGGACACACAAACCATTACCAAGCATGTCACTCGTGTTGCTAATGCAAAAGAAGATCATCTGGAAGCATCATATGAGAGACGTTTGAAAAATAAACACCTTGAGAATGAAGAAGACAGGGGTCTAGAAGTTGAACGTTTTGATGCCCTTCCAATCAAGACTTTGGATGGAAAACTTTGCTATAGGACAGTTCCTAAAGCGGCAAAAAAATCAGTTAATGGAGAAAAAGAAGATGAAAGTGAAGGAGACGAAGAAGTTAATGATGAGAATAAAGGTCTCGTGAAGTTAACTAAAGCAGAAAGGAGAGCAAAACTGAAGAAGAAGAAGAAAGAGGAGAAGAAGCAGGTGAAAGAAGAAGCTATGCCAGAGGAAGTGAAGCTAAACCCACAATCAGAAGCTTTGGCTGAGGTGAAAGAAGATCTCACTGCTGAAGAAATATCTGAAAGTAAGAGACGGAGTATTGCAGAGTTGGGATTCACCTTGCTGAGTGATCCAGAGTTGCATATTAAGTCTCTAAAGGAGTTGCTAATCTTCTGCAAGGATGAAGATGAAGCCATTGCCACGGCAGCAATACTATCATGCTCCATTGTTTTCAGAGACATTATTCCTGGTTACCGTATCAGGCTTCCTACTGAGAAGGAGCAAGAGATGAATGTTTCTAAGGTTGTGAAGAAGATGCGATTCTTCGAATCGACACTTCTTTCCTCATACAAGGCTTACCTTCAGAGGTTGATTACACTTCAACAGCATCCTCAGTATCATTGTGTAATTGTCCGTTGTCTCTGCACTTTGCTAGATGCACATCCACATTTCAACTTCCGGGAGAACTTGTTACCAGCCATTATTAAGAATCTGAGCTCCTCAGATGATGTTATAAGGAAACGCTGCTCTAAAACGATTCAGTCTATTTTTACTAATGAGGGGAAACATGGTGGAGAAGCAACTGTTGAAGCTGTGCAGTTGATAGCAAATCTTGTTAAAATTCATGATTGTCAATTGCTCCCAGACTCTATTGAGGTTTTCTTGGCGTTGTCATTTGATAAAGACCTTGGAAGGTCTGAAAAGACAGATGATGATAACAAGGGTAAATATAAGAAAAATAAAAAAAGAAAGAATTCCAACGAGCAAATGCAACCTGTAATCAGCGATAAAAAGCGAACTAAGCAGGAACTTCTATCAAAGACAAGAGAAGAGGTAAATGCTGATTTCAAGGCAGCTTCATTTTCCCCAGATGTTATAGAGCGAAGGAGGATGCAATCTGAGACACTTTCTGCTGTGTTTAGCACATACTTTCGTATCTTGAAGCATGCCATACAACCAGATCCTCTAGGGTCTAAGCTGAATAGCTCATCAGGCGGTGCACTTGGCGCTCATCCCCTACTCACCCCATGTTTGAAGGGAGTAGGGATGTTTGCTCACCTGATAGACCTGGATTTCATGGCTGATCTGATGAAGCACCTCAAGATTCTTGCTTCTAGCGGCAGTAGTCCAGGAAATCCTGAATGTCATTTGACAGTGACTGAGCGGATAGAATGCTGCATTGTTGCCTTCAAAGTGATGCGGAAGAATCTTGATGCCTTGAATGTGGATTTACAGGATTTCTTTATCCAGCTTTACAATCTCATTCTTGAGTATAGACCAGGAAGGGACCAAGGTGAGGTATTGGCAGAAGCTCTGAAGATAATATTGTGTGATGATAGGCAACATGACATGCAAAGAGCTGCTGCCTTCATAAAAAGGTTGGCAACTTCCTCACTGTGTTTAGGATCTGCAGAATCCATGGCAGCACTTGTCACGGTCAAAAATCTTCTACAAAAAAATATTAAGTGTCGGTATATGCTAGAAAATGACGTGGGAGGTGGCACATTATCAGGTTCTGTGGCGAAGTATCAGCCTTATTCTTCTGATCCACACCTAAGTGGTGCACTTGCCTCTGTCCTATGGGAGCTGAACTTGCTGTTGAAGCATTATCATCCTGCCATCTCAACAATGGCTTCGAGCATCTCGAAGATTAGCACTGCACCTAATCAGATTTACATGCCAACAATCACTCCTCAGCAAGCTTTCAAGGACTTTGCGTTAGAGAAAGAATCTTTCAGCATAAAGAATGACATTAAGAAACTGAATCACAAGCGAAAAAGGAGCAACTCTTTGTCTGTAAATTCCAGCTTGTTGCCTGAAGTCGACGAAGATGGTTTGAGAAAGAAACTTTCTGACCATTTCAATGTTGTCCATGATATCGTTGAGAATGAGAGGTTGAGGAGAGAGTTGGATCTCACGACAATGTCATTGCAGTTTCATGAAGAATACAAAACGCATAAAATATCGAAGGGTGGATCAAAGCGAAAACATAAGAAACATACACAGAAAACAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52181.p1 GENE.R_Transcript_52181~~R_Transcript_52181.p1 ORF type:complete len:841 (+),score=205.13,NOC3p|PF07540.7|1.6e+04,NOC3p|PF07540.7|3.9e-25,NOC3p|PF07540.7|1.6e+04,CBF|PF03914.13|1.4e+02,CBF|PF03914.13|9.5e-23 R_Transcript_52181:236-2758(+)
MGKKQKQKEKVVLPPELPPEVPDEEIEVSDEDVKFVTKNRAYAGFVSRLDTQTITKHVTRVANAKEDHLEASYERRLKNKHLENEEDRGLEVERFDALPIKTLDGKLCYRTVPKAAKKSVNGEKEDESEGDEEVNDENKGLVKLTKAERRAKLKKKKKEEKKQVKEEAMPEEVKLNPQSEALAEVKEDLTAEEISESKRRSIAELGFTLLSDPELHIKSLKELLIFCKDEDEAIATAAILSCSIVFRDIIPGYRIRLPTEKEQEMNVSKVVKKMRFFESTLLSSYKAYLQRLITLQQHPQYHCVIVRCLCTLLDAHPHFNFRENLLPAIIKNLSSSDDVIRKRCSKTIQSIFTNEGKHGGEATVEAVQLIANLVKIHDCQLLPDSIEVFLALSFDKDLGRSEKTDDDNKGKYKKNKKRKNSNEQMQPVISDKKRTKQELLSKTREEVNADFKAASFSPDVIERRRMQSETLSAVFSTYFRILKHAIQPDPLGSKLNSSSGGALGAHPLLTPCLKGVGMFAHLIDLDFMADLMKHLKILASSGSSPGNPECHLTVTERIECCIVAFKVMRKNLDALNVDLQDFFIQLYNLILEYRPGRDQGEVLAEALKIILCDDRQHDMQRAAAFIKRLATSSLCLGSAESMAALVTVKNLLQKNIKCRYMLENDVGGGTLSGSVAKYQPYSSDPHLSGALASVLWELNLLLKHYHPAISTMASSISKISTAPNQIYMPTITPQQAFKDFALEKESFSIKNDIKKLNHKRKRSNSLSVNSSLLPEVDEDGLRKKLSDHFNVVHDIVENERLRRELDLTTMSLQFHEEYKTHKISKGGSKRKHKKHTQKTG*

Click here to download the sequence:
Link to NCBI Protein BLAST