Transcript Information: R_Transcript_52198.p1


Annotated TAIR IDAT5G54470.1
Annotated Gene NameB-box type zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22114584-22115315 | Reverse length=215
E-Value7E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.102203640333
Replicate 215.05588371315
Replicate 318.772350810505
Condition 2: 8 Hour
Replicate 111.466551389929
Replicate 210.253282405227
Replicate 312.750399655296
Condition 3: 24 Hour
Replicate 116.126459711168
Replicate 214.309021621692
Replicate 316.762778711429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52198.p1 GENE.R_Transcript_52198~~R_Transcript_52198.p1 ORF type:3prime_partial len:205 (+),score=19.71,zf-B_box|PF00643.20|2.7e-06,zf-B_box|PF00643.20|8.9e+02,zf-B_box|PF00643.20|1.5e+03 R_Transcript_52198:86-697(+)
ATGAACCCAATACATCCCCCTCCTAAATTCCACACATTTCACTCCTCTATACCACACACAAAAACCTCCTCTCATAAGAACAATACCTTCTTCACAACAACTACTAGTACTATATATCTCCCTTTTTTTACTCATACCCACATCCTTTTCTCATCTCCAACCCAATCAACAACTTGTACATTTTTCAAGCTACCAAATCAAACCATGAAGAAGGTTGGTGCTATAGGGTGCGAGCTCTGCGGCTCACCAGCCAACACATACTGCGAATCGGACCAAGCACGGCTGTGTTGGAACTGCGATGACAAGGTTCACGGCGCCAACTTCCTGGTGGCTAAGCACACTCGAACCCTCCTTTGTCACCTTTGCCAATCTCCAACCTCATGGTCCGCTTCTGGTCCCAAACTCACCCCTTCCATGTCCTTTTGCCTCTCTTGCCTGAACCGCAACAAAACTAGCTCAAGTTTATCTACAACATCACTTCAACCGCCACAAGATGGTCATGTTTCCTACGAAGACCATGACCACCATCTAGAAGATGGGTCTGACGATATTGATAGTGATGAAGATATTGATGATTCAATCGAAAGCGATGATGATGATGAAGAAGATGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52198.p1 GENE.R_Transcript_52198~~R_Transcript_52198.p1 ORF type:3prime_partial len:205 (+),score=19.71,zf-B_box|PF00643.20|2.7e-06,zf-B_box|PF00643.20|8.9e+02,zf-B_box|PF00643.20|1.5e+03 R_Transcript_52198:86-697(+)
MNPIHPPPKFHTFHSSIPHTKTSSHKNNTFFTTTTSTIYLPFFTHTHILFSSPTQSTTCTFFKLPNQTMKKVGAIGCELCGSPANTYCESDQARLCWNCDDKVHGANFLVAKHTRTLLCHLCQSPTSWSASGPKLTPSMSFCLSCLNRNKTSSSLSTTSLQPPQDGHVSYEDHDHHLEDGSDDIDSDEDIDDSIESDDDDEEDD

Click here to download the sequence:
Link to NCBI Protein BLAST