Transcript Information: R_Transcript_52227.p1


Annotated TAIR IDAT1G21320.1
Annotated Gene Namenucleotide binding;nucleic acid binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7462834-7465200 | Reverse length=421
E-Value8E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0430263402696
Replicate 20.35993657856511
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 11.1193538261598
Replicate 20.25555293532784
Replicate 31.0372348925935
Condition 3: 24 Hour
Replicate 11.1806872288534
Replicate 21.0082404064264
Replicate 31.0005807856867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52227.p1 GENE.R_Transcript_52227~~R_Transcript_52227.p1 ORF type:5prime_partial len:175 (-),score=23.48 R_Transcript_52227:63-587(-)
TCTATGGATCCCGTACACAGAGATGTACTGCCGATGCAATCTGGGGTTTATGGTGTAGATGATATTTCACGTTTTGGTTTACGTAGTGAACCTACCCTGAATGGATTGGCAGGAGGGATGCCCAGTAGAGGCTACGCTTCTTCTCTGGAGGATCCTATTCTAATTAGGCATGGACGAGAGCTTTCTGTGGGAATCAGTCCTGTACCTCCTGGTAATCCAGATATGATTTATGAGAGGCCAAGCTCTCAACGAAATAGCCTCTCTATGCCGCCAGGGGATTCCAACATTCTTTTTGTTGATGGCCTTCCAGCTGACTGCACTAGAAGAGAAGTGGGACATATTTTTCGTCCTTTTATTGGCTTTAAAGATATCAAAGTAATACACAAGGAGCCAAGACGGGGAGTGGAGACAAGGCTTCAGTTCTGTGCTTTGTTGAGTTCAATGATTCCAAGTGTGCAGTTACTGCTATGGAAGCACTTCAAGGCTACAAGTTTGACGATAAGAAGCCCAATTCTTCAGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52227.p1 GENE.R_Transcript_52227~~R_Transcript_52227.p1 ORF type:5prime_partial len:175 (-),score=23.48 R_Transcript_52227:63-587(-)
SMDPVHRDVLPMQSGVYGVDDISRFGLRSEPTLNGLAGGMPSRGYASSLEDPILIRHGRELSVGISPVPPGNPDMIYERPSSQRNSLSMPPGDSNILFVDGLPADCTRREVGHIFRPFIGFKDIKVIHKEPRRGVETRLQFCALLSSMIPSVQLLLWKHFKATSLTIRSPILQF*

Click here to download the sequence:
Link to NCBI Protein BLAST