Transcript Information: R_Transcript_52250.p1


Annotated TAIR IDAT4G38130.1
Annotated Gene Namehistone deacetylase 1
Annotated Gene Symbol(s)HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19
Annotation TypeOrtholog
Chromosome Positionchr4:17896493-17899057 | Reverse length=501
E-Value1.1e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.854708963359
Replicate 246.621043810137
Replicate 356.41759620375
Condition 2: 8 Hour
Replicate 153.878716857866
Replicate 265.693492543443
Replicate 372.497314561986
Condition 3: 24 Hour
Replicate 168.321330126534
Replicate 258.51936427079
Replicate 365.794703467627


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52250.p1 GENE.R_Transcript_52250~~R_Transcript_52250.p1 ORF type:complete len:499 (+),score=108.79,Hist_deacetyl|PF00850.15|1e-81 R_Transcript_52250:176-1672(+)
ATGGATACTGGAGGTAATTCACTTCCATCAGGACCAGATGGGGTGAAGAGAAAGGTTTCATATTTCTATGACCCAGAAGTTGGAAACTATTACTATGGGCAAGGTCACCCTATGAAGCCACATCGCATTCGGATGACACATGCTCTTCTTGCTCACTATGGGCTGCTTCAACATATGCAAGTGCTGAAGCCTGTACCCGCCAGAGATAGAGATCTTTGCAGATTCCATGCTGATGATTATGTTTCCTTCCTGAGGGGTATTACACCGGAAGCACAACAGGACCAGTTAAGGCAATTGAAGCGGTTCAATGTCGGTGAAGATTGCCCTGTATTTGATGGTCTTTATTCTTTTTGCCAAACATATGCCGGAGGTTCTGTCGGTGGCGCTGTGAAGCTGAATCACGGACTTTGTGACATTGCCATTAACTGGGCTGGCGGTTTGCATCATGCAAAAAAGAGTGAGGCTTCTGGTTTCTGCTACGTGAACGATATCGTACTGGCGATTTTGGAACTTCTTAAAGTGCACGAGCGTGTTCTGTATGTGGACATCGATATCCACCACGGGGATGGTGTGGAAGAGGCCTTTTACACTACAGATAGGGTCATGACAGTTTCTTTTCACAAGTTTGGAGATTATTTTCCTGGCACAGGAGACATCCGTGATATTGGATATGGAAAGGGAAAATATTATTCTCTCAATGTGCCCCTGGATGATGGCATTGATGACGAGAGTTACCAGTCATTGTTTAAGCCAATTATGGGAAAAGTAATGGAGTTTTTTAAGCCTGGAGCTGTTGTTTTGCAATGTGGTGCCGATTCATTGTCAGGTGATAGATTAGGCTGTTTTAACCTATCCATCAGAGGTCATGCAGAGTGTGTCAAATACATGAGATCCTTCAATGTCCCGTTGCTGTTGGTGGGTGGAGGTGGCTATACTATACGAAATGTAGCTCGTTGCTGGTGCTATGAGACTGGGGTCGCACTTGGGATTGAACTTGATGATAAGATGCCGCAGCATGAGTACTATGAGTACTTTGGTCCTGACTATACTCTGCACGTTGCTCCAAGTAACATGGAAAATAAGAACTCACGACCGATGTTGGAGGATATTAGAGCGAAGCTTCTTGACAACCTCTCTAGGTTACAGCATGCACCAAGTGTGCAGTTCCAGGAGCGCCCACCTGAAGCTGAGGTCCCAGAGGAAGATGAAGATCAGCAGGATCCAGATGAAAGATGGGATCCAGATTCTGATATGGAGGTTGATGATCGTATTACTCTTCGAAGCAGGGTGAAGCGAGAGATTATGGAGACAGACCTTAAAGATCCGGAGGATATTAAGGAAGCTGTTGATCATGCAAACATGGATGTCTCATATGGTCCTGGAAACACGTCCATGAAGGCTCCAGGCATGGGTCCAGATCAGCCAGAAGTTTGTATTAAAATGGAGCAAGACAACTCAAACAAGCCACCTGATCAAGCAGCTGACATGAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52250.p1 GENE.R_Transcript_52250~~R_Transcript_52250.p1 ORF type:complete len:499 (+),score=108.79,Hist_deacetyl|PF00850.15|1e-81 R_Transcript_52250:176-1672(+)
MDTGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPVPARDRDLCRFHADDYVSFLRGITPEAQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEFFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRPMLEDIRAKLLDNLSRLQHAPSVQFQERPPEAEVPEEDEDQQDPDERWDPDSDMEVDDRITLRSRVKREIMETDLKDPEDIKEAVDHANMDVSYGPGNTSMKAPGMGPDQPEVCIKMEQDNSNKPPDQAADMNS*

Click here to download the sequence:
Link to NCBI Protein BLAST