Transcript Information: R_Transcript_52259.p1


Annotated TAIR IDAT5G54850.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22280755-22281363 | Reverse length=202
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.249764907389
Replicate 27.1854005869109
Replicate 38.1446178119653
Condition 2: 8 Hour
Replicate 15.7677815209066
Replicate 28.4474442511146
Replicate 38.7934469227652
Condition 3: 24 Hour
Replicate 17.9587065056041
Replicate 28.4300100648429
Replicate 39.3387539997429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52259.p1 GENE.R_Transcript_52259~~R_Transcript_52259.p1 ORF type:complete len:225 (+),score=35.31 R_Transcript_52259:369-1043(+)
ATGCTGATTGTCTGGTTACACTTCGTGCAAACTAGCTTCGGAAACTATAACTCAGACGAAGAAAACAAAATGGTTCAAACACTAGAAGCAATCAGAGGTGGCGGAGGCTCCATCAGGGTGGGCACTGTTGGAACAATTGGTTCTCTGATTACTAGGGAATTAGAATCTTCGAGTTTGGCATCCTGTGCCTCTTCATCATCCTTACATGCTGTGTCTCGTAGTCATGGCCCTCTCAAGCAGCAGAAATCAATGGACGATGCAAACGGTATTGGTAAGAATACTGTTATCAAGCACGGGAGTCTTGAAGCAGTGCGCCGGACAAGTGGCCAATATCAGCACCAGATATCAGTTACTAGTGCCACAACTCCCAAGCGCCAAAGCCAAAAGACGCCACTGAAGGATGTAGGCAATAGCACAGTCAGCAGGGGAACTAACATTGGGAAAAGCTCAGAAACTCCGAGCAAAACAAGAACCAGAAGAAGCTCTCATGTCCCAATGCTCCACTCCGAAAACATCAGCTTGGAGAACACTCCTGTCAGGGATAAGGATAAGTCCCTGAGGAAAGGAATTACTATTGTTGATATAGTGGATGTAAACTGTGGGAACCCTGGGGGTTCATTGAGCAATAGGCTTAAGAAGCTCAATTTCTCGAGGCTGTCTCAGAGTTTCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52259.p1 GENE.R_Transcript_52259~~R_Transcript_52259.p1 ORF type:complete len:225 (+),score=35.31 R_Transcript_52259:369-1043(+)
MLIVWLHFVQTSFGNYNSDEENKMVQTLEAIRGGGGSIRVGTVGTIGSLITRELESSSLASCASSSSLHAVSRSHGPLKQQKSMDDANGIGKNTVIKHGSLEAVRRTSGQYQHQISVTSATTPKRQSQKTPLKDVGNSTVSRGTNIGKSSETPSKTRTRRSSHVPMLHSENISLENTPVRDKDKSLRKGITIVDIVDVNCGNPGGSLSNRLKKLNFSRLSQSFM*

Click here to download the sequence:
Link to NCBI Protein BLAST