Transcript Information: R_Transcript_52285.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8605386570828
Replicate 21.2535104726148
Replicate 30.85472901478181
Condition 2: 8 Hour
Replicate 11.827303354272
Replicate 21.8355947780078
Replicate 32.1673564919865
Condition 3: 24 Hour
Replicate 11.5419422764876
Replicate 22.1396892953545
Replicate 33.2668215950593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52285.p2 GENE.R_Transcript_52285~~R_Transcript_52285.p2 ORF type:5prime_partial len:134 (+),score=20.66,RVT_1|PF00078.23|4.1e-17 R_Transcript_52285:1-402(+)
CTAGCAAAGAGAAACTCTGGTTATCCAGCTTATAAGATCACGAACAGATACACATTTACCATGATGATGGTGACCTTTGCAGAATTAGAGGTGCAATGGTTCAGAGGCAAACGTGGCCTGAGGCAGGGATACCCTATTTCCCCTTACCTATTTGTGCTCTGTATGGAAGCTTTATCTAGAATGCTCCGGAAATTGAAAGATCAGAAGGGATTCTCTTTTCATCCCAAGTGTGCTAGGGTGGGAATAACCCATTTGGTCTTTGATGATGACTTGTTGATTTTCACTAGAGGGGATGTCCCTTCTGTTAATTCTGCTGTTAGCAAGGTCCAGGAATTCTCTCAGATGTTTGGTCTCCATATCAACTCCCAGAAGTCAAATATTTACTTTGGGGGGCATAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52285.p2 GENE.R_Transcript_52285~~R_Transcript_52285.p2 ORF type:5prime_partial len:134 (+),score=20.66,RVT_1|PF00078.23|4.1e-17 R_Transcript_52285:1-402(+)
LAKRNSGYPAYKITNRYTFTMMMVTFAELEVQWFRGKRGLRQGYPISPYLFVLCMEALSRMLRKLKDQKGFSFHPKCARVGITHLVFDDDLLIFTRGDVPSVNSAVSKVQEFSQMFGLHINSQKSNIYFGGHK*

Click here to download the sequence:
Link to NCBI Protein BLAST