Annotated TAIR ID | AT3G24255.1 |
Annotated Gene Name | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
Annotated Gene Symbol(s) | |
Annotation Type | Homolog |
Chromosome Position | chr3:8789471-8793208 | Forward length=746 |
E-Value | 2E-22 |
Replicate 1 | 5.6769468196101 |
Replicate 2 | 2.8569480048095 |
Replicate 3 | 4.8237730359068 |
Replicate 1 | 3.569753529026 |
Replicate 2 | 3.7429121872395 |
Replicate 3 | 5.4101992777827 |
Replicate 1 | 5.4295462018004 |
Replicate 2 | 4.1204749331208 |
Replicate 3 | 5.8146602083982 |
>R_Transcript_52372.p1 GENE.R_Transcript_52372~~R_Transcript_52372.p1 ORF type:5prime_partial len:926 (+),score=106.50,RVT_1|PF00078.23|1.5e-42 R_Transcript_52372:1-2778(+)
ATCCTTTGGAGGTCGGATCGGGTTCATTTTAACCTAATCCAGAAAAAGGATCAGATGATCCATGGCGTAATAAAGGTCAGTCACTCTCCAATTTCTTTCTTTTTGTCTGCTATTTATGCTAGCCCAAAATATAGAAATAGGAAAAATTTGTGGACTGATTTGAATATTTGTGCTGATTCTATCACTGGAGCTTGGCTAGCCATAGGAGATTTTAATGAGATGCTTAGTGATTGTGAAAAGTTTGGGAAACAGCCGGTCAGTAGTTACAAATGTAGGGTGTTTCAGGACACCATTGATAAGTGTGGTCTAGTTGATCTAGGTTTTGTGGGACAAAAATTCACTTGGACCAACAAAAGAGAGGGAGCGCTTATTATGGAAAGATTGGACAGGGCCCTTATCAATGCTGATTGGATTTCTATGTACCCTGAATCTCACTTACTGCACCTACCTAGAATCACTTCGGACCATTGCCCTATTCTTTTGAAGACAACCACTAAATTAGCCAAACACTATTGTAAACCATTTAGAATGGAACCCTGGTGGACTTTCGATCATGAATTTCCAAGCCTTCTTCAACAGTTTTGGGACCACGGCAAGGACCCTATGAGTAATGTAGCCCTGTTAGCCAAACCTATTAGTAATTGGGCTAGAAATCGTTTTGGGAATCTGGGTAGGAAAAAGAAGAAACTCCTTGCTAGACTCCATGGGGTTCAGAAGGACATTTGTTACTCCCCTAACTGTATCTATTTGATTGAACTTGAGAAATTGCTAACTACTGAATTGGAGGAGATTCTTAATTATGAGGAGTATTACTGGCTTACTAGATCTAGGCATAACTGGATAACACAGGGAGATAGGAATACTTCTTTCTTTCATAAGTTTGTTCTGTTTAGGAGGAAAACCAATAGAATTCTATCGCTTAGGAACAATGTTGGGGAAGAAATCTCTGACCCCCAGCTTCTGAATGACCACATTAGAGATCATTTCTTAACCTTGCTTACCACTGATAAGCCACTCTCCTGGGCACATCCACAGTGGCTCTTCCCTTCAACCAATGAGGTCATTAAGGTAGGGCACCCACCTACTACTGAGGAAGTTAGGAGGGGGATTTTTGGCCAGGGGAGCTATAAGGCCCCAGGCCCGGATGGGTTCCATGCCCTTTTCTATCAAAAATTTTGGGACACTGTTGGCTCTGACTTGATTCTCTCTACATCTACCATCTTCTCTTCGACCACCTTCCCTATAGGTTTCAATAGAACTCTAATCAGCTTAATTCCCAAGTGCCCTAACCCCCAGTTTGTCAAGCAACTTAGACCCATAAGTCTGTGCAATACCAACTATAAAGTGGTGTCAAAAATACTTGTGGATAGAATCAGGCCCCACCTCAAAAGCCTCATTTCTCCTAACCAGAATAGCTTCATACCTGGCAGAGGTTCTGATGTAAACTACATTGTTGCCTCTGAGATCTTACATTCCATGGGGAAGAGGAAGGGTAGGAAAGGGTGGTTTGCACTCAAACTTGATCTGGAAAAGGCGTATGATAGAATGGAATGGGACTTCATAAGGAACATGCTTTTCTCCTTTAATTTTGATTATCACTCTATCTGCCTCATTATGGAGTGTATCACCTCTGTTACTACTTCTATCCTTGTCAATGGGGGGATCACTGAGGAGTTTAAACCTTCCCGGGGCCTGAGACAGGGAGACCCTCTCTCACCCTACATTTTCATCCTATGTATGGAGTTTTTATCAAAACTCATCCATAATGCTTGTGAAGAGGGAAATTGGTCCCCCTTCTCCTTCACTCACTCAGGCTTGTCCATCTCCCACCTCCTCTTTGCGGATGATGTCATCCTCTTTGGAGAGGCCAACCCCAGAACCCTAGCTGCTATGACCTCTACCTTACATTCCTTTTGCCAAGCCTCGGGTCAACAAATTAATGCAAGCAAAAGCAAATTGTTCTTCTCTCCAAACACCTCAGCTGAGATGATCCAGACCTTTGAGGACTCCCTGGGCACTAGTGCTTCTGGAGACCTAGGGACTTACCTTGGCCTACCTTTGACCATTAAGAGGCCCACAAAGAATCAGCTCCGCGGCATTGTGTCCAAAGTTAGAGACAGGCTTGCATCCTGGAAGACAAAATTCATCACGAAAGCTGGTAGGATGTGTCTTATTAATGCAACACTTAATGCCATCCCAAATTACTACATGCATGGAATAGCCTTCCCTAAAAGCCTGACAACTGAGATGAATAAAATTGTTAACAACTTTCTTTGGGGGGATTCCTCAGATCATAAGAAACTGCATCTAGTGAGTTGGGAAACTGTCACCAACCTCAAGAAGCAAGGAGGGCTAGGAATTAGAGATCTCAAAGATTTGAATCTAGCTCTCATGGCCAAGCTTGGGTGGAAATCCCTCCTATCTGAGGACAATCTGGCTGGGCAGGTCCTCAAGGACAAATATATTAACAAGAAGCCCTATCCCACCAACTTTAGAGCTGGCTCCCATGTGTGGCAAGACATAGGTAAGGGTTGGGACATCATTGATGGACATGTCTTATGGACCTTGGGTAATGGATCCTCCATTCTATTTTGGACGGATCAATGGCTTTCTTGTGGTAGATTGAGAGACCTCATTGAAGGTCCCCTTACTCCCCAGGAAATTACTCTAAAGGTCAGAGACTGCTTGACCAACAACACCTGGGATCTTAATAAAATTTCCTTCACTCTCCCCCAGGTAATCATGGACTGCATCCTCTTTTCCCCCCATCCCTTCTAG
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_52372.p1 GENE.R_Transcript_52372~~R_Transcript_52372.p1 ORF type:5prime_partial len:926 (+),score=106.50,RVT_1|PF00078.23|1.5e-42 R_Transcript_52372:1-2778(+)
ILWRSDRVHFNLIQKKDQMIHGVIKVSHSPISFFLSAIYASPKYRNRKNLWTDLNICADSITGAWLAIGDFNEMLSDCEKFGKQPVSSYKCRVFQDTIDKCGLVDLGFVGQKFTWTNKREGALIMERLDRALINADWISMYPESHLLHLPRITSDHCPILLKTTTKLAKHYCKPFRMEPWWTFDHEFPSLLQQFWDHGKDPMSNVALLAKPISNWARNRFGNLGRKKKKLLARLHGVQKDICYSPNCIYLIELEKLLTTELEEILNYEEYYWLTRSRHNWITQGDRNTSFFHKFVLFRRKTNRILSLRNNVGEEISDPQLLNDHIRDHFLTLLTTDKPLSWAHPQWLFPSTNEVIKVGHPPTTEEVRRGIFGQGSYKAPGPDGFHALFYQKFWDTVGSDLILSTSTIFSSTTFPIGFNRTLISLIPKCPNPQFVKQLRPISLCNTNYKVVSKILVDRIRPHLKSLISPNQNSFIPGRGSDVNYIVASEILHSMGKRKGRKGWFALKLDLEKAYDRMEWDFIRNMLFSFNFDYHSICLIMECITSVTTSILVNGGITEEFKPSRGLRQGDPLSPYIFILCMEFLSKLIHNACEEGNWSPFSFTHSGLSISHLLFADDVILFGEANPRTLAAMTSTLHSFCQASGQQINASKSKLFFSPNTSAEMIQTFEDSLGTSASGDLGTYLGLPLTIKRPTKNQLRGIVSKVRDRLASWKTKFITKAGRMCLINATLNAIPNYYMHGIAFPKSLTTEMNKIVNNFLWGDSSDHKKLHLVSWETVTNLKKQGGLGIRDLKDLNLALMAKLGWKSLLSEDNLAGQVLKDKYINKKPYPTNFRAGSHVWQDIGKGWDIIDGHVLWTLGNGSSILFWTDQWLSCGRLRDLIEGPLTPQEITLKVRDCLTNNTWDLNKISFTLPQVIMDCILFSPHPF*
Click here to download the sequence:
Link to NCBI Protein BLAST