Transcript Information: R_Transcript_5240.p1


Annotated TAIR IDAT4G36010.1
Annotated Gene NamePathogenesis-related thaumatin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17039472-17040976 | Reverse length=301
E-Value1.4E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3723253873818
Replicate 22.9037436745944
Replicate 33.8990191653025
Condition 2: 8 Hour
Replicate 11.4760982415006
Replicate 21.4272903302884
Replicate 33.0896358502786
Condition 3: 24 Hour
Replicate 14.4775865160416
Replicate 27.0389124118864
Replicate 36.2868938994279


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5240.p1 GENE.R_Transcript_5240~~R_Transcript_5240.p1 ORF type:complete len:282 (+),score=-14.66,Thaumatin|PF00314.13|3.1e-81 R_Transcript_5240:189-1034(+)
ATGTCTATAAATTCCCTTCCCTCCACTTCTCGTACCAAAATTGTTGCAAGTGTTCTAATTCCTCCTATATCACCCATGCCTCATTTTTCCCAACTTCTGTTTTCCCTGCTTTTCTTGCACTTCATCATAGGGGTAAAATCAACCACATTCACGTTAGTCAACAAGTGTAGCTACACCGTCTGGCCAGCCACCTTATCTGGTGCCGGAACCACGCAGCTCCCCGCCACCGCCACCGGTTTCTCTCTGGCCCCCGGCGACACCTCCCCCCTCACCGTCCCTGCAGGTTGGTCGGGCCGGATATGGGCCAGGACCCTCTGTTCAGGCCCGGAAGGAAACTTCTCATGCGCGACTGGAGACTGCAAAACCGGGTCAATCCAGTGTTCTGGGTCGGGCGCTGTCCCGCCCGCCACCCTGGCGGAGTTCACCCTAAACGGGGCGGACGGGCTTGACTTTTATGACGTGAGCTTGGTTGACGGGTACAACCTCCCTCTCCTAATCCGGCCGGTAGGCGGGTCTGGTCGGGGAAACTGCACTGCAGCGGGGTGTAAGTCGGACCTGAACGGGTCCTGCCCGCTGCAGCTGCGGGTGGTGATGACAAGCGCGTCAGGTGCAAACGAGGGGGGAGTGGCGTGTAGAAGCGCGTGTGAGGCGTTTGGGGACCCACAATATTGCTGTAGTGGGGCCTACGCGACGCCCAATACATGTAAACCAAGTTCATATTCGGAGTACTTCAAGGCAGCATGCCCAACCGCATATAGCTATGCGTATGATGATGCTAGTAGCACTTTCACCTGTGATGGGGCTAATTATGTCATTACCTTCTGTCCTACTGCCACAGCCACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5240.p1 GENE.R_Transcript_5240~~R_Transcript_5240.p1 ORF type:complete len:282 (+),score=-14.66,Thaumatin|PF00314.13|3.1e-81 R_Transcript_5240:189-1034(+)
MSINSLPSTSRTKIVASVLIPPISPMPHFSQLLFSLLFLHFIIGVKSTTFTLVNKCSYTVWPATLSGAGTTQLPATATGFSLAPGDTSPLTVPAGWSGRIWARTLCSGPEGNFSCATGDCKTGSIQCSGSGAVPPATLAEFTLNGADGLDFYDVSLVDGYNLPLLIRPVGGSGRGNCTAAGCKSDLNGSCPLQLRVVMTSASGANEGGVACRSACEAFGDPQYCCSGAYATPNTCKPSSYSEYFKAACPTAYSYAYDDASSTFTCDGANYVITFCPTATAT*

Click here to download the sequence:
Link to NCBI Protein BLAST