Transcript Information: R_Transcript_52402.p1


Annotated TAIR IDAT1G27910.1
Annotated Gene Nameplant U-box 45
Annotated Gene Symbol(s)PUB45, ATPUB45
Annotation TypeOrtholog
Chromosome Positionchr1:9720962-9723975 | Reverse length=768
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3218789239398
Replicate 25.4209591754926
Replicate 36.8951011152146
Condition 2: 8 Hour
Replicate 16.691980722358
Replicate 27.4348524005957
Replicate 39.875939279606
Condition 3: 24 Hour
Replicate 110.206682558412
Replicate 29.2498755800532
Replicate 311.550312674824


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52402.p1 GENE.R_Transcript_52402~~R_Transcript_52402.p1 ORF type:complete len:794 (+),score=165.98,U-box|PF04564.11|8.9e-19,Arm|PF00514.19|8.5e+03,Arm|PF00514.19|1.6e+02,Arm|PF00514.19|5.2,Arm|PF00514.19|30,Arm|PF00514.19|2.5,KAP|PF05804.8|5.3e-06 R_Transcript_52402:371-2752(+)
ATGGATGTTGCAGAGCTTGAAGAAAACTTATTTGCTATAACTGATGCCAAGTTACATGGAGGAATGTGCAAGATTTTGTCTAACATATACTGCAAAGTGTTGAACATCTTCCCTGCCCTAGAAGCGGCACGTCCTCGCAGTACATCAGGGATTCAGGCATTATGTTCGCTGCATATAGCACTTGAGAAGGCCAGAAACCTTTTGCAACATTGTTCAGAATGCAGTAAACTATACTTGGCCATTACTGGAGATTCTATTGTTTTGAAGTTCGAGAAGACAAAATGTGCGCTGATAGATAGTCTTAGACGCGTTGAAAATATTGTTCCACAATCTATAGGTTGTCAGGTTCAAGAAATTGTCAGTGAATTGGAGGGGATTGCCTTTTCTCTTGATCTGTCAGAGAAGCAAGTAGGTGATGACATAATTGGATTGCTGCAGCAGGGTCGAAAATTTGATGACAGTTCCAATGACAACAATGAGCTTGAATGTTTTCACCAAGCTGCATGTAAACTAGGCATTACTTCTTCCCGGGCTGCTCTTGCAGAGAGAAGAACTCTCAAGAAACTCATTGAGAAAGCCCGTGCAGATGAAGACAAGCGGAAAGAAGCCATTGTTGCTTATCTTTTACATCTTATGCGTAAATATTCGAAGTTGTTTAGAAGTGACCTGGGAGATGATCAGGATTCCCAAGGTTCCGGACCTTGTTCACCCACTGTGCAAGGATCTTCAGAGGATAGTGGCATTGCAGCCTGCAATGGAAGGGAATTTGACCGACAGCTATCTAAAATTAATTCATTCAACTTTAAGCCATCATTTGCTTTTAGGCCAAGCAGTAGGAGGTCTGAGCAAATTCCTATTCCACCGGAAGAGCTGAGATGTCCAATCTCATTGCAGCTTATGTATGATCCAGTTATCATTGCCTCTGGACAGACTTATGAGAGAATTTGCATTGAGAAGTGGTTCAATGATGGTCACAATACTTGCCCTAAGACGCAGCAACACCTCTCTCATCTTTGTTTGACGCCTAATTATTGTGTCAAGGGCCTTATTGCTAGTTGGTGTGAACAGAATGGTGTTCATGTTCCTGATGGGCCTCCTGAGTCTCTTGATCTCAACTATTGGAGGCTAGCATTGTCTGACAGTGAGTCAGTGCAATCCAAGTGTTTAGACAGCAGTAACTCCAGCAAGTTTAGGGGAGTGAAGGTCGTACCACTGGAGAACGATATCATTGAAGAGGTTGAAGCAAGTGAGGAAGTTGAAAGTGGTTCGGCAGAGCAGGAAGAGAATAATTCTAATGTTTTGGAACAGTACGAGAACTTTTTGGCTGTTCTAGAAGGAGGGGAAGACTTGAGTGAGAAGAGGCAGGCCGTTGAGCAGATTCGGCGTTTATTAAAAGATGATGAAGAAGCAAGGATGTTCATGGGTGGTCATGGGTTTGTTGAGGCACTTGTACGCTTTCTTAGGGCTGCACTTGACGAAAAGAATGCTTTGTCTTTGGAAGTGGGCGCTATGGCACTTTTCAACCTTGCTGTTAACAATAACAGAAACAAGGAGTTGATGCTGGGTGCAGGGATCATTCCTATGCTGGAGGAAATGATAGCCGATCCCAATTCTTATGGATTAGCAGCTGCCCTGTATCTAAACCTTTCCTGCCTCGAAGAAGCAAAGCCAGTTATTGGTTCAAGCAAAGCCGTTTCCTTCCTCATCAAGCTTCTCCTCGCCAAAACTGACCCACAGTGGAAGCTTGATGCCCTTCATGCTCTTTTCAATCTCTCGACTTACCCAGCCAATATCCCACACCTCCTCAAATTCGGTATCATCAACGGCCTACAGCTCCTCCTTGTCGAACCCAGAGATCAGACGTGGACCGAGAAATCCATAGCCGTGCTCATAAACTTGGCATCCAACAACACAGCAAAAGATGCGATCATAGCAGCCCCCGTCCTAATTGGTGCGCTTGCTACCATATTAGACACAGGTGAACCTATTGAGCAGGAACAATCTGTGTCATGTCTCTTGATTCTCTGTAATGGGAATGACAAATGCAGTCAAATGGTCTTACAAGAAGGGGTGATCCCGTCGTTGGTATCCCTTCAAGTGAATGGGACTACTCGAGGCAGAGATAAGGCTCAGAAGCTCTTGTTGCTGTTCCGAGAGCAAAGGCAAAGGGATTCATCTCCTCAACCAGTGGTTCGGTCTCCTTCAGTTCGGGAATTTGCAGCTAAACCACCTGAACCAAAACCCCTTAGTAAGTCGATCAGCGAAAAGACAAGGCCAATTCTTGATATCAAGCCCCTTGGTAAAACTGTTTCGAGACGGAAGCTTGGCAAGACATTTAGTTTCTTCAGGAAGAGCAAGAATTTCTCTGCTCCTCAGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52402.p1 GENE.R_Transcript_52402~~R_Transcript_52402.p1 ORF type:complete len:794 (+),score=165.98,U-box|PF04564.11|8.9e-19,Arm|PF00514.19|8.5e+03,Arm|PF00514.19|1.6e+02,Arm|PF00514.19|5.2,Arm|PF00514.19|30,Arm|PF00514.19|2.5,KAP|PF05804.8|5.3e-06 R_Transcript_52402:371-2752(+)
MDVAELEENLFAITDAKLHGGMCKILSNIYCKVLNIFPALEAARPRSTSGIQALCSLHIALEKARNLLQHCSECSKLYLAITGDSIVLKFEKTKCALIDSLRRVENIVPQSIGCQVQEIVSELEGIAFSLDLSEKQVGDDIIGLLQQGRKFDDSSNDNNELECFHQAACKLGITSSRAALAERRTLKKLIEKARADEDKRKEAIVAYLLHLMRKYSKLFRSDLGDDQDSQGSGPCSPTVQGSSEDSGIAACNGREFDRQLSKINSFNFKPSFAFRPSSRRSEQIPIPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFNDGHNTCPKTQQHLSHLCLTPNYCVKGLIASWCEQNGVHVPDGPPESLDLNYWRLALSDSESVQSKCLDSSNSSKFRGVKVVPLENDIIEEVEASEEVESGSAEQEENNSNVLEQYENFLAVLEGGEDLSEKRQAVEQIRRLLKDDEEARMFMGGHGFVEALVRFLRAALDEKNALSLEVGAMALFNLAVNNNRNKELMLGAGIIPMLEEMIADPNSYGLAAALYLNLSCLEEAKPVIGSSKAVSFLIKLLLAKTDPQWKLDALHALFNLSTYPANIPHLLKFGIINGLQLLLVEPRDQTWTEKSIAVLINLASNNTAKDAIIAAPVLIGALATILDTGEPIEQEQSVSCLLILCNGNDKCSQMVLQEGVIPSLVSLQVNGTTRGRDKAQKLLLLFREQRQRDSSPQPVVRSPSVREFAAKPPEPKPLSKSISEKTRPILDIKPLGKTVSRRKLGKTFSFFRKSKNFSAPQC*

Click here to download the sequence:
Link to NCBI Protein BLAST