Transcript Information: R_Transcript_5241.p1


Annotated TAIR IDAT5G54930.1
Annotated Gene NameAT hook motif-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22305897-22306839 | Reverse length=286
E-Value6.5E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.991982902112
Replicate 220.210342646704
Replicate 326.459119362401
Condition 2: 8 Hour
Replicate 126.057150398405
Replicate 234.497938027711
Replicate 343.195009230333
Condition 3: 24 Hour
Replicate 142.416697311079
Replicate 235.087911871373
Replicate 341.785618038622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5241.p1 GENE.R_Transcript_5241~~R_Transcript_5241.p1 ORF type:complete len:374 (+),score=93.86 R_Transcript_5241:598-1719(+)
ATGAATCACCAGCAGCAAGTCGGTGACCCCTTTCAACCACCAGGCATTCCTTTGAAGAGAAAGCGAGGTCGTCCTCGGAAAGATCGAAGCCAGAACCCCAGCAATAGCCCTTTTATGCCACCTAAAAAGGATCAGAGCCAACCCCGTGCTGAAAATGCTCCTGTTCCTCCTGGCTTTGAAAGATCAAATGGGAATGAGTCACATACTGTAGATACAACTAATGAAAATAATGAAGATTCCATGGTAGGCCAGGTAGTTACAGGTGTAATTGAGGCAGCATTTGAAGCTGGGTATTTACTCTCGGTTCGTGTTGGTGACTCAGAAGCTAGTTTGAGGGGTGTTGTATTCAAGCCAGGACATTATGTTCCTGTTTCAGCTGAAAATGATGTGGCCCCTAGTTTGCAAATGATCCGAAGAAATGAGGTGCCTTTCCCATCTGGAAACCCAGGCCACAAACGTCGAGGCAGAGAGCGCAAGCAGCACCATTCTCCACACCAATCAAATGGTTCGCCGCCTTCTAACCAGTTGGCCAAGTTCCGAGCCAAACCGATGCCTATAGTGGCAGTTCAATCTCCCCATCCTGTGGGTGCTAGAGGGACAGTGGTGCCAGTTGTTCTTCAACCTATCAACTTATCAAACGGTGCAACTCCAGCCATGGAAGCACCTCGTATGGCATCACAACCTGCTCACTTGGCCGCCTGCAAAAACAAACCACTACCTGTAGCACAAGCTGCCCAGGAGGCTGTGCCTAAGAGCTCAGAGGGAGATAGTGGTTCTGGTTCTCAACCTTTTGAAGAGCTGGTCAGTGCTGCTAAGAAGATGCAGGGGTCTCCAGGTTCGGGTGAAACTCAGAATGAGAGCGGTACATCATCTAGCAAGATGCTACCAAAAGATTCCGGTCTTACCCCTGAACAGGTCGAGGACTTGAGCAAGCCTCTGACGGTGAAGCCCCTCCAAGCCATTCGATCAGGGTTCCCAGATCCTTCTGCACCAATGTCCCATACTTTCCCGGAGAGGAGAGCAGGGAAGATGACCGAGTTACTTTTGGCTGTGCAAGAAAATTTGAGGGAGAGACAGATGGCCGAGAGTCAGCATCCGGACTTCCAGAGCCCAGGAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5241.p1 GENE.R_Transcript_5241~~R_Transcript_5241.p1 ORF type:complete len:374 (+),score=93.86 R_Transcript_5241:598-1719(+)
MNHQQQVGDPFQPPGIPLKRKRGRPRKDRSQNPSNSPFMPPKKDQSQPRAENAPVPPGFERSNGNESHTVDTTNENNEDSMVGQVVTGVIEAAFEAGYLLSVRVGDSEASLRGVVFKPGHYVPVSAENDVAPSLQMIRRNEVPFPSGNPGHKRRGRERKQHHSPHQSNGSPPSNQLAKFRAKPMPIVAVQSPHPVGARGTVVPVVLQPINLSNGATPAMEAPRMASQPAHLAACKNKPLPVAQAAQEAVPKSSEGDSGSGSQPFEELVSAAKKMQGSPGSGETQNESGTSSSKMLPKDSGLTPEQVEDLSKPLTVKPLQAIRSGFPDPSAPMSHTFPERRAGKMTELLLAVQENLRERQMAESQHPDFQSPGN*

Click here to download the sequence:
Link to NCBI Protein BLAST