Transcript Information: R_Transcript_52422.p1


Annotated TAIR IDAT3G16840.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5738020-5743042 | Reverse length=826
E-Value1.9E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.732094823256
Replicate 216.724100331592
Replicate 317.677407921597
Condition 2: 8 Hour
Replicate 116.890993685693
Replicate 215.95224200829
Replicate 316.822894706488
Condition 3: 24 Hour
Replicate 120.308829470661
Replicate 215.898393815664
Replicate 317.841466475548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52422.p1 GENE.R_Transcript_52422~~R_Transcript_52422.p1 ORF type:complete len:806 (+),score=217.84,DEAD|PF00270.25|2e-41,DEAD|PF00270.25|8.2e+02,Helicase_C|PF00271.27|1.2,Helicase_C|PF00271.27|2.2e+03,Helicase_C|PF00271.27|4.5e-25 R_Transcript_52422:339-2756(+)
ATGGGCAGGCCCAAAAGACGTGAGACTCGCAATCACAGTCAAAGCAAGCACAACGAAAACCTTGATGAACTTCCATGGAACTCCTCTCTTCCTGTCTCTGACGATCCTTTCTCTTTCTTCTCCGCCCCTGGCCCCACCCTCGAAGGAGGGTTTATGTCATTGGAGGAGATTGATGAATCACAGTACAATTTGGTGATTCCTGAACCTAATGAGGGTAATAAGAAAGAAACAGCAGGGAAGTCCTCCAAAACAAAGAAACGGAAACAGGAAGAAACTGATGGTGATGAAGATGGCGGTGTTGTCGAAATGGAGGCTGAGGAAAATACTAAAGATGAGGATGATATGAAGCAAAAGAAGAGGAAGAAGAAGAAGAGAAAGAAGAATGACAACAAAAAAAAGAAACAGAAGTCAGAACAAGCAGAAATAACTAGTGAGTCAGTGACTGTTACTGAAACCAAGGATGAAGAAGGTGAGGAGTCAGTTGATGAAGATGAATTTAATGCGTGGAATGAGCTGAGGCTCCATCCATTACTCATGAAAGCAATCTACAAACTTGGGTTTAAGGAGCCCACACCTATACAAAAGGCTTGTATACCTGCTGCAGCTCATCAGGGAAAGGATGTTATTGGTGCTGCAGTGACTGGATCTGGGAAAACTCTTGCTTTTGGCCTGCCAATCTTGCAGCGCCTTCTTGATGAGCAAGAAAAGGTAGAAAAGCTTATGTTAGAGGATGAACAGGGTGTTCAGAAAGTTGCACCAAGACACTTGTTACGGGCTTTGATAATAACACCTACAAGAGAACTTGCTGTTCAGGTTAGTAGTCATCTTAAAGCAGCAGCCAGAGGTACTGGATTTCGGGTGGTTGCTATTATTGGTGGAATGTCTACAGAGAAGCAGGAGAGGCTTTTGAGAACAAGGCCTGAGATAATTGTTGGAACTCCTGGAAGGCTGTGGGAACTTATGTCAAGAGGTGAAACCCATCTCTCTGAGTTACATTCATTATCCTTCTTTGTGCTGGATGAAGCGGATCGAATGATAGAGAATGGCCATTTTCGTGAATTACAGTCTATAATTGACATGCTTCCTATGGCTAGTGGATTGGTTGAAGAGCATTCCCAGAATGTACAGAATTGTGTAACCGTCTCTAGCAGCCAGAGAAAGAAACGACAAACATTTGTGTTCTCTGCAACAATTGCACTATCTTCTGACTTTCGAAAGAAACTAAAGCGTGGAACTCTTAAATCTCAAAAGTCGATGGTTGATGGATTGTCATCTATAGAAGCTTTATCAGAACGAGCAGGAATGAGACCAGATGCTTCCATTATTGACTTGACTACCGCATCCATAATGCCCATTAATCTTGAGGAGTCATTTCTTGAGTGTAGGGAAGAAGATAAAGATGCCTACTTGTATTACATCTTGTCTGTTCATGGGCAAGGCAAAACGATTGTGTTCTGCACATCAATTGCTAGTCTACGCCATGTTTCTGCCCTTTTGCGCATTCTCAAAATCAGGATTTACACCTTTCATGCTGAGATGCAACAAAGGGCTCGCCTTAAGGCAATGGATCGCTTTCATGAGGATGAACATGGAATACTTGTAGCTGCTGATGGTGCAGCAAGAGGTCTTGACATAATTGGCGTTCGCACTGTCATCCACTATCAACTTCCACATTCTGCAGAGGTTTATGTTCATAGATGTGGACGAACTGCAAGAGCTTCCACGGATGGGTGCAGTGTAGCATTAATCTCAGCAAATGAGAGATCAAAGTTTGCCTCTTTGTGCAAATCGTTTGCAAAGGACACTCTTCAGCGTTTTCCCATTGAAAGTTCTTACATGCCGGAGGTTATGAAACGATTATCTCTTGCACGTCAAATTGATAAGATTTCCCGGAAGGAGTCACAGGACAAGGCGAAGGAGAGCTGGATCAAACAGAATGCCGAGTCAGTGGGGCTAGTTGTGGATGATGATGACAGTGAAGAAGAAAGAGTTAGCAAATGCAGGCAAAAAAAAGCTACCTCCATGCATTTGCAAAAACTTGAGCAGGAGCTCAAGATGCTGCTGTCACGCCCACTACAACCAAAATCTTTTTCACACCGCTTTTTGGCTGGGGCTGGTGTTTCACCTTTGTTGCAGCACCAACTTAAAGAGCTAGCTCAGCCGAAATTGAGCAATGACTCTGGTGAAGGCAAAAAGAAGTTACTTGTTATAGGACAGGATTGTGTTGAGCCACTACAGGCTCTTCGTAGGGCTGGTCCTGAGGTGCGCATGGATGTCAAAGAGCTTGCAGAGAAGCAAAGAGACATGGAGAACCTAGAAGAAAACGAAGAGAAGCAAAAAAACGTCAGAAAGAGCAACGCAGAAAGCAGAAGAAAAGAGCAAATGCAACTACCGAGTAATGTGGTTCTTGAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52422.p1 GENE.R_Transcript_52422~~R_Transcript_52422.p1 ORF type:complete len:806 (+),score=217.84,DEAD|PF00270.25|2e-41,DEAD|PF00270.25|8.2e+02,Helicase_C|PF00271.27|1.2,Helicase_C|PF00271.27|2.2e+03,Helicase_C|PF00271.27|4.5e-25 R_Transcript_52422:339-2756(+)
MGRPKRRETRNHSQSKHNENLDELPWNSSLPVSDDPFSFFSAPGPTLEGGFMSLEEIDESQYNLVIPEPNEGNKKETAGKSSKTKKRKQEETDGDEDGGVVEMEAEENTKDEDDMKQKKRKKKKRKKNDNKKKKQKSEQAEITSESVTVTETKDEEGEESVDEDEFNAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAVTGSGKTLAFGLPILQRLLDEQEKVEKLMLEDEQGVQKVAPRHLLRALIITPTRELAVQVSSHLKAAARGTGFRVVAIIGGMSTEKQERLLRTRPEIIVGTPGRLWELMSRGETHLSELHSLSFFVLDEADRMIENGHFRELQSIIDMLPMASGLVEEHSQNVQNCVTVSSSQRKKRQTFVFSATIALSSDFRKKLKRGTLKSQKSMVDGLSSIEALSERAGMRPDASIIDLTTASIMPINLEESFLECREEDKDAYLYYILSVHGQGKTIVFCTSIASLRHVSALLRILKIRIYTFHAEMQQRARLKAMDRFHEDEHGILVAADGAARGLDIIGVRTVIHYQLPHSAEVYVHRCGRTARASTDGCSVALISANERSKFASLCKSFAKDTLQRFPIESSYMPEVMKRLSLARQIDKISRKESQDKAKESWIKQNAESVGLVVDDDDSEEERVSKCRQKKATSMHLQKLEQELKMLLSRPLQPKSFSHRFLAGAGVSPLLQHQLKELAQPKLSNDSGEGKKKLLVIGQDCVEPLQALRRAGPEVRMDVKELAEKQRDMENLEENEEKQKNVRKSNAESRRKEQMQLPSNVVLEI*

Click here to download the sequence:
Link to NCBI Protein BLAST