Transcript Information: R_Transcript_52423.p1


Annotated TAIR IDAT3G16840.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5738020-5743042 | Reverse length=826
E-Value2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0197948597435
Replicate 21.6349578193019
Replicate 31.5490211899038
Condition 2: 8 Hour
Replicate 10.90316714969347
Replicate 20.9622510628379
Replicate 31.8597961701216
Condition 3: 24 Hour
Replicate 13.0108599642891
Replicate 21.6722224978511
Replicate 31.7940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52423.p1 GENE.R_Transcript_52423~~R_Transcript_52423.p1 ORF type:internal len:488 (+),score=124.56,DEAD|PF00270.25|1.9e-41 R_Transcript_52423:2-1462(+)
TTTACTCGGACTCCACTCACCGGCATCTTCTCGCCGGTCGGATCTGGCAGACACAGGCACCGCTCACCGGCATCTTCTCTCACGAGTCACGGCCTCCCAACCGGTCCACCAGACCACCACTCACGAGGCGGCAATTTTTTGAAAAAAACAGAGAGGCGAGGCACTGTGAAGCTAAAATCGTTGCAGTTGAAGACGTTGCTCCTCGCCGTACGTAGCCAAGCTAGCTTCTCAGCTTCAGTTCTCCGTCATACACTCCTCCATATTCCGATGGGCAAGCCCAGAAGACGTGAGATTCGCAGTCACAGTCGAAGCAAGCACAACGAAAACCTTGATGAACTTCTATGGAACTCCTCTCTTCCTATCTCCGACGATCCTTTCTCTTTCTTCTCCGCCCCTGGCCCCACCCTCGAAGGAGGGTTTATGTCATTGGAGGAGATTGATGAATCACAGTACAATTTGGTGATTCCTGAACCTAATGAGGGTAATAAGAAAGAAACAGCAGGGAAGTCCTCCAAAACAAAGAAACGGAAACAGGAAGAAACTGATGGTGATGAAGATGGCGGTGTTGTCGAAATGGAGGCTGAGGAAAATACTAAAGATGAGGATGATATGAAGCAAAAGAAGAGGAAGAAGAAGAAGAGAAAGAAGAATGACAACAAAAAAAAGAAACAGAAGTCAGAACAAGCAGAAATAACTAGTGAGTCAGTGACTGTTACTGAAACCAAGGATGAAGAAGGTGAGGAGTCAGTTGATGAAGATGAATTTAATGCGTGGAATGAGCTGAGGCTCCATCCATTACTCATGAAAGCAATCTACAAACTTGGGTTTAAGGAGCCCACACCTATACAAAAGGCTTGTATACCTGCTGCAGCTCATCAGGGAAAGGATGTTATTGGTGCTGCAGTGACTGGATCTGGGAAAACTCTTGCTTTTGGCCTGCCAATCTTGCAGCGCCTTCTTGATGAGCAAGAAAAGGTAGAAAAGCTTATGTTAGAGGATGAAGAGGCTGTTCAGAAAGTTGCACCGAGACAATTGTTACGGGCTTTGATAATAACACCTACAAGAGAACTTGCTGTTCAGGTTAGTAGTCATCTTAAAGCAGCAGCCAGAGGTACTGGATTTCGGGTGGTTGCTATTATTGGTGGAATGTCTACAGAGAAGCAGGAGAGGCTTTTGAGAACAAGGCCTGAGATAATTGTTGGAACTCCTGGAAGGCTGTGGGAACTTATGTCAAGAGGTGAAACCCATCTCTCTGAGTTACATTCATTATCCTTCTTTGTGCTGGATGAAGCGGATCGAATGATAGAGAATGGCCATTTTCGTGAATTACAGTCTATAATTGACATGCTTCCTATGGCTAGTGGATTGGTTGAAGAGCATTCCCAGAATGTACAGAATTGTGTAACCGTCTCTAGCAGCCAGAGAAAGAAACGACAAACATTTGTGTTCTCTGCAACAATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52423.p1 GENE.R_Transcript_52423~~R_Transcript_52423.p1 ORF type:internal len:488 (+),score=124.56,DEAD|PF00270.25|1.9e-41 R_Transcript_52423:2-1462(+)
FTRTPLTGIFSPVGSGRHRHRSPASSLTSHGLPTGPPDHHSRGGNFLKKTERRGTVKLKSLQLKTLLLAVRSQASFSASVLRHTLLHIPMGKPRRREIRSHSRSKHNENLDELLWNSSLPISDDPFSFFSAPGPTLEGGFMSLEEIDESQYNLVIPEPNEGNKKETAGKSSKTKKRKQEETDGDEDGGVVEMEAEENTKDEDDMKQKKRKKKKRKKNDNKKKKQKSEQAEITSESVTVTETKDEEGEESVDEDEFNAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAVTGSGKTLAFGLPILQRLLDEQEKVEKLMLEDEEAVQKVAPRQLLRALIITPTRELAVQVSSHLKAAARGTGFRVVAIIGGMSTEKQERLLRTRPEIIVGTPGRLWELMSRGETHLSELHSLSFFVLDEADRMIENGHFRELQSIIDMLPMASGLVEEHSQNVQNCVTVSSSQRKKRQTFVFSATI

Click here to download the sequence:
Link to NCBI Protein BLAST