Transcript Information: R_Transcript_52454.p1


Annotated TAIR IDAT5G62760.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25204730-25209393 | Reverse length=661
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6374403471705
Replicate 25.2056943180904
Replicate 35.3007326668783
Condition 2: 8 Hour
Replicate 13.642525364053
Replicate 22.7720101456015
Replicate 37.0506256128776
Condition 3: 24 Hour
Replicate 14.7433486007653
Replicate 24.3745968047426
Replicate 35.4267036413795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52454.p1 GENE.R_Transcript_52454~~R_Transcript_52454.p1 ORF type:3prime_partial len:121 (+),score=37.52 R_Transcript_52454:314-673(+)
ATGATTATTTTTGCTACCCCAACTCATGAATGCGTTTTCTTTTGTAGCCAGAGATCGGATTATGATGTTTATGTGCTGGAAGCTCCATACAAGGATCCGGTGGGTTGCGCTGCTAGGAATGTCCATGGTTTTGCTCAAGATGATGTGGAAAAGATGGCCACACAATGGGAAGAAGCTCCGTCGTTGTACATAAAACTGGATGTCAAGTCATTATTTCATGGAGATGATTTGACAAAGGGTGATATACAAGAGGTTGACATGGACACAGAAGATTGGGATGTAGCTGGAAGTTTGGCTACCTTGGAGGAGAGGGAACCTGATAAGATTTTCGCATCTTCAGGTGGAGATCTTGGACCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52454.p1 GENE.R_Transcript_52454~~R_Transcript_52454.p1 ORF type:3prime_partial len:121 (+),score=37.52 R_Transcript_52454:314-673(+)
MIIFATPTHECVFFCSQRSDYDVYVLEAPYKDPVGCAARNVHGFAQDDVEKMATQWEEAPSLYIKLDVKSLFHGDDLTKGDIQEVDMDTEDWDVAGSLATLEEREPDKIFASSGGDLGPD

Click here to download the sequence:
Link to NCBI Protein BLAST