Transcript Information: R_Transcript_5250.p1


Annotated TAIR IDAT4G16790.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9451747-9453168 | Reverse length=473
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5477026532375
Replicate 26.2181351232883
Replicate 37.3125354633871
Condition 2: 8 Hour
Replicate 19.5118167679683
Replicate 28.5143357779899
Replicate 39.7041302932069
Condition 3: 24 Hour
Replicate 17.4171377197198
Replicate 28.2283081245615
Replicate 39.6811001499738


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5250.p1 GENE.R_Transcript_5250~~R_Transcript_5250.p1 ORF type:5prime_partial len:260 (+),score=88.50,DUF761|PF05553.7|3.2e-16 R_Transcript_5250:2-781(+)
ACTATGTCATCAGAGTCCTTGGCTAAGAGCATGGAAGATTTGGGGAAGAGAAAGATTGAAGATTTTGGGAAGAGAAAGATTGTTTACAATTCTCGTCTTCCACCTCCTCCTCCTCCACCACCACCCCGGCCGCCAATTAATAGGTCTCGATTGGTTAAGCCAAGTTCAAGCATGGATAATAAAGAAACATCTAGCAATCGTATGGATTTGCGGCGAAGTGTATGGAGTGAACCAAAAGACATAGGCAGGGAAATTTCTGAGGAATTATGGAGCAAAGAAAATGCAGGGTTAGAAGCAAAAGCAAGAAATGGGACTGATACATCTTTGGTGGGGAAGTCTGTTAGAAGTGTAAGACCTGGTGAGAAAACAAGAGCATCAGGGGAAGTGAGAGAAATTGAGGATGATGAAGGGATGAATGAGGTTGAAGCTCCTGTGACTGAGAAGCCTGAGAGAAAGTCTTCGGGGTACAATCCAATGTCAAATGCATCATTTGCAGAACTTCCACAGGAAACCAGGGATTTCCTTGAGCAGGTTCTGGTGGAAACTACTGACGAATCTGAAAGCGAGGATGACCATTACGTAGAACAAAGAGAGGAAGAGAGGGTCGAGAGTCCAAAGGTCGAGGAAATGCCTTCAAGCAGTGTTCAAACTGACGAAGGACCTGATGTCGATAAGAAGGCTGATGAGTTCATTGCCAAATTCAGAGAGCAAATCAGGCTTCAGAGGATTGAGTCAATCAAGAGATCAACCAACCAACTAAAGAGAAGCTCTATGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5250.p1 GENE.R_Transcript_5250~~R_Transcript_5250.p1 ORF type:5prime_partial len:260 (+),score=88.50,DUF761|PF05553.7|3.2e-16 R_Transcript_5250:2-781(+)
TMSSESLAKSMEDLGKRKIEDFGKRKIVYNSRLPPPPPPPPPRPPINRSRLVKPSSSMDNKETSSNRMDLRRSVWSEPKDIGREISEELWSKENAGLEAKARNGTDTSLVGKSVRSVRPGEKTRASGEVREIEDDEGMNEVEAPVTEKPERKSSGYNPMSNASFAELPQETRDFLEQVLVETTDESESEDDHYVEQREEERVESPKVEEMPSSSVQTDEGPDVDKKADEFIAKFREQIRLQRIESIKRSTNQLKRSSMR*

Click here to download the sequence:
Link to NCBI Protein BLAST