Transcript Information: R_Transcript_52530.p1


Annotated TAIR IDAT2G19830.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)SNF7.2, VPS32
Annotation TypeOrtholog
Chromosome Positionchr2:8558101-8559389 | Reverse length=213
E-Value2.4E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.415250454646
Replicate 239.207377307985
Replicate 348.384639616363
Condition 2: 8 Hour
Replicate 147.222739541116
Replicate 266.854473259871
Replicate 373.347324547686
Condition 3: 24 Hour
Replicate 159.9714147989
Replicate 247.036215389088
Replicate 352.932510314231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52530.p1 GENE.R_Transcript_52530~~R_Transcript_52530.p1 ORF type:3prime_partial len:98 (-),score=25.86,Snf7|PF03357.17|3.4e-12 R_Transcript_52530:1-291(-)
ATGTTTACGAGGATTTTCGGGAAACCTAAAGAGGGAACGACCAGTGCTGTGGTAACCTTAGATAAATTGAGTGAGACTCTTGAAATGTTGGAGAAAAAGGAACATGTTCTCTTAAAGAAGGCTGCTGCAGAGGTTGAAAAGGCCAAGGAGTTCACTAGAGCAAAGAATAAGCGTGCTGCCATACAATGTTTAAAGAGGAAAAGGCTGTATGAGCAGCAAGTAGAGCAGCTTGGCAATATGCAGTTGCGAATTCATGATCAGATGATATTGCTTGAAGGTGCAAAAGCTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52530.p1 GENE.R_Transcript_52530~~R_Transcript_52530.p1 ORF type:3prime_partial len:98 (-),score=25.86,Snf7|PF03357.17|3.4e-12 R_Transcript_52530:1-291(-)
MFTRIFGKPKEGTTSAVVTLDKLSETLEMLEKKEHVLLKKAAAEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQVEQLGNMQLRIHDQMILLEGAKAT

Click here to download the sequence:
Link to NCBI Protein BLAST