Transcript Information: R_Transcript_52567.p1


Annotated TAIR IDAT5G12410.1
Annotated Gene NameTHUMP domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4021974-4023950 | Reverse length=376
E-Value1.1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.026004271818
Replicate 229.200152896838
Replicate 330.441183295549
Condition 2: 8 Hour
Replicate 130.161396557534
Replicate 229.913232661718
Replicate 334.54015089354
Condition 3: 24 Hour
Replicate 142.368050424637
Replicate 244.353953309748
Replicate 341.407865158214


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52567.p1 GENE.R_Transcript_52567~~R_Transcript_52567.p1 ORF type:5prime_partial len:453 (+),score=92.46,THUMP|PF02926.13|1.6e-10 R_Transcript_52567:2-1360(+)
TTCAGCAAATTTGGGGTTTGCGGAGTTATATCAATCAAACGACGTCGTTTTCATGCTATTGCAGTGAAACGGTGCGTATTATCCTTGAAATTAATTCCTAAACCCTCTTCTCCAGTCAAGAATTCAGGCTTCACTCACGTTCTCTGGGGAGTCGTCATGGGCGAAGCAAAAATAGCAATCAACGATGGCAAGAAACGCAGAAGATGTTACTTACCTCATAACAAACCAGTAAAGAGGAAGGGACCAATCCCATTAAGGCCAGGAGTGCAAGGCTTCTTCATAACCTGTGATGGTGGAAGGGAACGCCAGGCTTCTCATGAAGCCCTCAATGTTCTTGACTCTTTCCTCGAAGAACTAATCGACGGGAAGGAGCCCAAGACAGATGTTGCAGCAATACCTGAGAAACCATTGAACAAGAAGATAACATTTACGTATTCTGATTCTTCTGATAGTGGAGAAGATGATGAAGATGACAATGATAATAAAACTGAGGGGGAAGAGGAGAACAAGTCAGAAATACCTGCTAAAGATGATGTAAATAATGAAAGTCCCAAGGACGGAAGTTCTGATCATGCAAAGAAGGATGATCAAGAGCATGAGGTTCCATCTGAGAAAACTGCTGAAGAAGATAAAGAAGTTAGTAAGCAACAGGAAGATAGCGAAAACAAGGAGAGTGAGGAACCACCAGCAAAGAAACAATGCTGTGATAACGAAGTATTAGAAAGCAAAAATCATGTCCCTGATAAAAAAGCGAAGTCTGTTGATCAGTTAATTGAAGATGAGCTGAAGGAATTAGGAGATAAGAGCAAGAGGCGATTTTCCAAACTTGATACGGGTTGTAATGGTGTTGTCTTCATTCAAATGCGAAGAAGCCAGGGAGATCCCAGCCCGACAGATATCGTACAACACATGATGGAATCCTCGGCCAGGACAAAGAAACATATCTCTAGGTTTCTGCTTAGAGTCTTACCTGCAGAAGTCTCATGCTATGCTTCTGGGGAAGAAATCTCAAGATCCATGAAACCACTTGTTGAGCGATACTTTCCAGTCGATGCAGAGGCTCCGGTTAAGTTTGCAGTCAAATATGATGCTCGTGCAAATTCAGGGATTGACAGGATGACAATAATAGATGCAGTTGCAAAATCTGTTCCTGGACCGCACAAAGTGGATCTCAAAAATCCAGAGAAGACCATTGTAGTCCAAATCATTAAGACTGTATGTATGCTTGATTGGGGTTGTGGAGAAGTACAAGGAGCTTGCGAAGTACAATTTGAGACAACTAACATCATCTCACCCGTAGCTGCACAGTACCTTGAGAGATCTGAGATAGACATCCTGAAGAGACCTTGGGAGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52567.p1 GENE.R_Transcript_52567~~R_Transcript_52567.p1 ORF type:5prime_partial len:453 (+),score=92.46,THUMP|PF02926.13|1.6e-10 R_Transcript_52567:2-1360(+)
FSKFGVCGVISIKRRRFHAIAVKRCVLSLKLIPKPSSPVKNSGFTHVLWGVVMGEAKIAINDGKKRRRCYLPHNKPVKRKGPIPLRPGVQGFFITCDGGRERQASHEALNVLDSFLEELIDGKEPKTDVAAIPEKPLNKKITFTYSDSSDSGEDDEDDNDNKTEGEEENKSEIPAKDDVNNESPKDGSSDHAKKDDQEHEVPSEKTAEEDKEVSKQQEDSENKESEEPPAKKQCCDNEVLESKNHVPDKKAKSVDQLIEDELKELGDKSKRRFSKLDTGCNGVVFIQMRRSQGDPSPTDIVQHMMESSARTKKHISRFLLRVLPAEVSCYASGEEISRSMKPLVERYFPVDAEAPVKFAVKYDARANSGIDRMTIIDAVAKSVPGPHKVDLKNPEKTIVVQIIKTVCMLDWGCGEVQGACEVQFETTNIISPVAAQYLERSEIDILKRPWEI*

Click here to download the sequence:
Link to NCBI Protein BLAST