Transcript Information: R_Transcript_52578.p1


Annotated TAIR IDAT5G38560.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15439844-15443007 | Forward length=681
E-Value3E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.222617384521
Replicate 29.2251461671609
Replicate 311.291037586765
Condition 2: 8 Hour
Replicate 15.1670959101273
Replicate 25.6694519313872
Replicate 35.9743096372612
Condition 3: 24 Hour
Replicate 19.2192769182119
Replicate 27.6759247477442
Replicate 39.0308324849876


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52578.p1 GENE.R_Transcript_52578~~R_Transcript_52578.p1 ORF type:complete len:635 (+),score=167.61,Pkinase_Tyr|PF07714.13|1.4e-47,Pkinase|PF00069.21|9.5e-47 R_Transcript_52578:706-2610(+)
ATGGCTTCATCCCCTGATTCTCAACCTGGAGGCCCTCCTGCTTCACCACCTCCAACGCCTGGTTCATCTAGTTCTCCTCCATCCCCTTCTTCCACGCCACCCCCAGAAGCTTCGCCCCCACCACCATCTGCCCCTCCACCACAAACCCCGCCTCCTAGTCCGCCAGCACCCTCACCACCTTCACCCCCACCACAAAGTTCACCAGCACCTCCAGCAGATTCCCCTCCTCCGCAAAGTTCACCATCACCGCCACCCCCAGAATCCCAAAATTCCCCTCCACCAGCGTCTTCCCCACCTCCTCCTCAAGCAGCTACTCCTAGTCCACCTTCTCCGACTACTTTTCCTCCCCCAGCTCCTGCACATTCTCCACCTGCCCCTGCCACCCCAGCCTCTCCAGACTCACCCCCGGGTTCACCTCCCTCCTTCCCTTCTCCTCCTGGTACATCTTCATCCCCTCCAGTTCCATCGACTTCTCCTTTAACTTCTTCCAACTCATCCACTCCCTCAGGGTCAACACCAAAATCTGAAACTCCTGGCAAGAATGTAGCTGTGAATCCCTCTCCACCTAGCACAGCTGGCGCTGACAATGGGCAGGGAATTCGAATGGGAATAGCCATTGGAGTTGTTGCAGCAGTCATTGTAATTGGTTTTATGATGGCCATTGTGTTCGTGCAAAGGCGAAGGAAAAGGCACGATAGATACAATTCAGTATACATGCTGCCCTCCCCATATGCGTCTTCACAGGCTTCAGCTGGGTCCTCCTTTATGAAGCAAAATTCATCCGGTGGTGGTGAGTTCATGAATCCACCTCCAGATGCCGGTGGATTAGGCAATTCTAAATCATGGTTCACTTATGAAGAATTGACTACAGCCACAAATGGATTTGCCTCTCAAAACATTTTGGGGGCTGGTGGATTTGGTTGTGTGTACAAAGGCTGTCTGCAAGATGGCCGAGTAGTAGCAGTTAAGAAGCTCAAAGATAATAGTGGACAGGGAGATCGGGAGTTCAAAGCAGAGGTTGAAATTATCAGTCGTGTGCATCATCGGTATTTGGTTTCCCTTGTGGGTTATTGCATAACTGATTACCAAAGATTACTGGTTTATGAATTTGTCCCCAACAACACTCTTCATTACCACCTCCACGCTTCTAATAATCCTGTCATGGAGTGGACACTCAGAGTCAAGGTTGCTTGTGGTGCTGCTCGTGGATTAGCCTACCTACATGAAGACTGTCATCCAAAGATCATCCATAGGGATATTAAATCGGCTAACATTCTTTTAGAAAACAACTTTGAAGCAAAGGTAGCTGATTTTGGGCTTGCGAAATTGGCACAGGAGCTGGAATCAAATACACATGTTTCAACACGTGTCATGGGAACCTTTGGGTACATGGCACCTGAATATGCATCAAGTGGAAAGTTGACTGAAAAGTCTGATGTCTTCTCATTTGGTGTTGTGCTTTTGGAGCTGATTACTGGGCGGAAGCCTGTAGATGAAACCAGGCCATTAGGAGATGAGAGCTTGGTTGAATGGGCTCGACCATTAATGACCGAGGCACTGGACAAGCAAAACTTTGATGAGCTTGCAGACCAAAGATTGCAAGGGAACTATGATAGGGGAGAGATGTTCAGAATGATTGAGGCAGCTGCAGCTTGTGTACGGCATTCTGCCACCAAGAGGCCAAAAATGAGCCAGGTGGTGAGAGCACTGGATTCGATGAGTGAGCTGTCAGATCTAACAAACGGTATGAGACCAGGACAAAGTGAAATCTATGATTCAAGAGAGCAGTCAGCGCAAATCAGAATGTTCCAAAGGATGGCATTTGGAAGCCAAGAGTTCAGTTCAGACTATTACAATAACAGCCAGGGTGGCTGGTCAAGTGGAGGGAGGAGTGGACAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52578.p1 GENE.R_Transcript_52578~~R_Transcript_52578.p1 ORF type:complete len:635 (+),score=167.61,Pkinase_Tyr|PF07714.13|1.4e-47,Pkinase|PF00069.21|9.5e-47 R_Transcript_52578:706-2610(+)
MASSPDSQPGGPPASPPPTPGSSSSPPSPSSTPPPEASPPPPSAPPPQTPPPSPPAPSPPSPPPQSSPAPPADSPPPQSSPSPPPPESQNSPPPASSPPPPQAATPSPPSPTTFPPPAPAHSPPAPATPASPDSPPGSPPSFPSPPGTSSSPPVPSTSPLTSSNSSTPSGSTPKSETPGKNVAVNPSPPSTAGADNGQGIRMGIAIGVVAAVIVIGFMMAIVFVQRRRKRHDRYNSVYMLPSPYASSQASAGSSFMKQNSSGGGEFMNPPPDAGGLGNSKSWFTYEELTTATNGFASQNILGAGGFGCVYKGCLQDGRVVAVKKLKDNSGQGDREFKAEVEIISRVHHRYLVSLVGYCITDYQRLLVYEFVPNNTLHYHLHASNNPVMEWTLRVKVACGAARGLAYLHEDCHPKIIHRDIKSANILLENNFEAKVADFGLAKLAQELESNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDETRPLGDESLVEWARPLMTEALDKQNFDELADQRLQGNYDRGEMFRMIEAAAACVRHSATKRPKMSQVVRALDSMSELSDLTNGMRPGQSEIYDSREQSAQIRMFQRMAFGSQEFSSDYYNNSQGGWSSGGRSGQV*

Click here to download the sequence:
Link to NCBI Protein BLAST