Transcript Information: R_Transcript_52655.p1


Annotated TAIR IDAT1G48900.1
Annotated Gene NameSignal recognition particle, SRP54 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18084972-18087743 | Reverse length=495
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.819701036463
Replicate 238.775425768809
Replicate 348.861549146632
Condition 2: 8 Hour
Replicate 146.207196755285
Replicate 256.217781564432
Replicate 366.897468173523
Condition 3: 24 Hour
Replicate 160.495673481067
Replicate 253.092699829333
Replicate 363.765591275336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52655.p1 GENE.R_Transcript_52655~~R_Transcript_52655.p1 ORF type:complete len:496 (+),score=134.14,SRP54|PF00448.18|2.9e-78,SRP_SPB|PF02978.15|1.4e+03,SRP_SPB|PF02978.15|1.1e-28,SRP_SPB|PF02978.15|1.4e+02,SRP54_N|PF02881.15|2e-16,cobW|PF02492.15|8.2e-07 R_Transcript_52655:252-1739(+)
ATGGTGTTAGCACAATTAGGGGGGAGCATATCCCGTGCTCTCCAACAGATGAGCAATGCGACGATCATCGATGAGAAAGTCCTGAATGAATGTCTGAATGAGATCACTCGTGCTCTTTTACAATCTGATGTCCAATTTAAGCTTGTTAGGGATATGTCTACTAACATCAAGAAGATCGTTAATCTTGATGATCTTGCTGCTGGTCATAACAAGCGCAGAATCATTCAACAGGCTGTTTTTAATGAGCTTTGCAAAATGTTGGATGCTGGGAAGCCATCTTTTACTCCAAAGAAGGGGAAACCAAGTATTGTCATGTTTGTTGGTCTACAAGGGTCTGGTAAGACTACAACCTGTACAAAATATGCCTATTATCATCAGAAGAAGGGCTGGAAACCAGCTTTGGTCTGTGCTGACACATTTAGAGCTGGTGCTTTTGATCAATTGAAGCAGAATGCAACTAAAGCTAAGATTCCCTTTTATGGAAGCTACATGGAATCAGACCCTGTGAAGATTGCTGTAGAAGGTGTGGAAAGATTCAAAAAAGAAAATTGTGATCTCATTATCATTGATACCAGTGGTCGCCACAAACAAGAGGCTGCTCTTTTTGAGGAAATGCGGCAAGTTTCTGAGGCTACGAAACCAGATCTTGTCATATTTGTTATGGACAGTAGCATTGGTCAAGCTGCATTTGATCAGGCTCAAGCGTTTAAGCAAAGTGTTGCTGTTGGGGCTGTGATTATTACTAAAATGGATGGTCATGCAAAGGGAGGTGGTGCTCTTAGTGCTGTGGCTGCAACCAAGAGTCCTGTGATATTCATTGGTACTGGAGAACACATGGATGAGTTTGAGGTTTTTGATGTCAAGCCATTTGTCAGCCGCCTTTTAGGCATGGGTGACTGGTCTGGTTTCATGGATAAAATTCATGAAGTTGTTCCAATGGATCAGCAGCCTGAGCTTCTGCAGAAGCTGTCTGAAGGAAATTTCACTTTGAGAATTATGTATGAGCAGTTTCAGAACATACTTAAGATGGGTCCCATTGGTCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAGTTAATGCCCAAAGGTCAAGAAAAGGAAAGCCAGGCAAAGATCAAACGCTACATGACCATGATGGACTCGATGACAGATGAAGAGTTGGATAGTTCAAATCCGAAACTTATTAATGAGTCAAGAATCATGCGGATTGCTCGTGGATCTGGCCGTCCTGTTAGAGAAGTGATGGATATGTTTGAGGAGTACAAACGCCTGGCCAAGATCTGGAGCAAGATGAAGGGACTTAAGATACCTAAGAAAGGAGAAATGAGCGCCTTATCACGAAATATGAATGCACAACATATGAGCAAGGTCCTTCCACCACAGATGTTGAAGCAAATCGGTGGCATGGGGGGATTACAGAACTTGATGAAACAAATGGGTTCCAATAAAGACATGATGGGTATGTTTGGTGGTGGAGAGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52655.p1 GENE.R_Transcript_52655~~R_Transcript_52655.p1 ORF type:complete len:496 (+),score=134.14,SRP54|PF00448.18|2.9e-78,SRP_SPB|PF02978.15|1.4e+03,SRP_SPB|PF02978.15|1.1e-28,SRP_SPB|PF02978.15|1.4e+02,SRP54_N|PF02881.15|2e-16,cobW|PF02492.15|8.2e-07 R_Transcript_52655:252-1739(+)
MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMSTNIKKIVNLDDLAAGHNKRRIIQQAVFNELCKMLDAGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIIDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGQEKESQAKIKRYMTMMDSMTDEELDSSNPKLINESRIMRIARGSGRPVREVMDMFEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSNKDMMGMFGGGEK*

Click here to download the sequence:
Link to NCBI Protein BLAST