Transcript Information: R_Transcript_52661.p1


Annotated TAIR IDAT1G48900.1
Annotated Gene NameSignal recognition particle, SRP54 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18084972-18087743 | Reverse length=495
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.920473752755
Replicate 22.0156448399646
Replicate 31.649285106923
Condition 2: 8 Hour
Replicate 12.3506430349355
Replicate 23.2199669851307
Replicate 33.049470584225
Condition 3: 24 Hour
Replicate 12.7549368673245
Replicate 23.3523993513678
Replicate 32.1012196499421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52661.p1 GENE.R_Transcript_52661~~R_Transcript_52661.p1 ORF type:5prime_partial len:125 (+),score=22.31,SRP54|PF00448.18|7e-12 R_Transcript_52661:3-377(+)
CACAGCAACAACAATGACAACCACCACCGGAGCACCATCATCATCGTCATCTTTGTTTTCACCGCCGTAGGGAGCACCAACCACCACCACGAACACTACCTCAACCTCTATTATCCCCAATCTAAGGGAATCAGGGGATGGATATCAATGATATGGTGGTGCTTGAATGTATTCCTTCAAGAAAAGAAACCAGATCTTGTCATATTTGTTATGGACAGTAGCATTGGTCAAAATGCATTTGATAAGGCTCTAGCTTTTAAGCAAAGTGTTGCTGGTGGAGCTGTGATTATTACTAAAGTGGATGGTCATGCAAATGGAGGTGGTGCTCTTAGGTGGCAGCGACCAAGAGTCTGGAACAGGAGAACACATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52661.p1 GENE.R_Transcript_52661~~R_Transcript_52661.p1 ORF type:5prime_partial len:125 (+),score=22.31,SRP54|PF00448.18|7e-12 R_Transcript_52661:3-377(+)
HSNNNDNHHRSTIIIVIFVFTAVGSTNHHHEHYLNLYYPQSKGIRGWISMIWWCLNVFLQEKKPDLVIFVMDSSIGQNAFDKALAFKQSVAGGAVIITKVDGHANGGGALRWQRPRVWNRRTHE*

Click here to download the sequence:
Link to NCBI Protein BLAST