Transcript Information: R_Transcript_52688.p1


Annotated TAIR IDAT5G11450.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3654475-3656357 | Forward length=297
E-Value3.7E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6284263774795
Replicate 21.2597780249779
Replicate 32.0157929084614
Condition 2: 8 Hour
Replicate 12.1547561153576
Replicate 22.772749348307
Replicate 33.049470584225
Condition 3: 24 Hour
Replicate 12.6631056384137
Replicate 21.5879786401216
Replicate 32.1887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52688.p1 GENE.R_Transcript_52688~~R_Transcript_52688.p1 ORF type:3prime_partial len:250 (+),score=47.01 R_Transcript_52688:169-915(+)
ATGGCTACCATCTTTCACTCTCCATCTTGCTTCACCTCAAATTCTGGCACCCATTTAGCCCCTCACGTTTTCTTCTTAAGAAACCAGAGTAATTCTCCTATATGCCTGAGAAAATGCAAAACAAAAGGGAAGATATTTGCAAGTTCTCACATTTCCACATTACCCACTTCAGAAATTGGGATTTACAAGAGGGATTTTTTGCTCTTTGGGTTTTCTGCTTCTCTGGCCTTACTTCTCCCCACTTCTGGAGTTGGTGCTGAGGAGGAAGTGCAAATGGTTGATTTAATGGATGATATAAATGCCTATACCTATGCATATCCAGTGGAACTACCTGCAAAAAAACTCGCCTTTAAGTGGGTGGAATCCAGAAAGCCAGAAAGATATTCATCGGCAGCTCCACTCTCCCCTAATGCTCGGCTGCGGATAGTGTCAGAGCGTGTGGATATACTTGACAACCTCATCATTTCTGTTTCGATAGGTCCCCCCAATTCAGAGTTCTTGAAATCCAAAGACAAGCGAATGTGGAGTGCGAAAGATGTTGCTGATTCTGTATTGTCTGATAAGTCTGCTCTGCGAGTCACCTCAAGTCAACGACTGGCTGAGAGTTCTATTCTTGATGCACATTCAAGTGATATAGATGGTGAACTATACTGGTTTTATGAATACTTAGTTCGCAAATCACCAACGAAATCTGTTCTGGAGTCAAATAATTACAGGCAATATGTTGCTGCAACTGCTGAGCGGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52688.p1 GENE.R_Transcript_52688~~R_Transcript_52688.p1 ORF type:3prime_partial len:250 (+),score=47.01 R_Transcript_52688:169-915(+)
MATIFHSPSCFTSNSGTHLAPHVFFLRNQSNSPICLRKCKTKGKIFASSHISTLPTSEIGIYKRDFLLFGFSASLALLLPTSGVGAEEEVQMVDLMDDINAYTYAYPVELPAKKLAFKWVESRKPERYSSAAPLSPNARLRIVSERVDILDNLIISVSIGPPNSEFLKSKDKRMWSAKDVADSVLSDKSALRVTSSQRLAESSILDAHSSDIDGELYWFYEYLVRKSPTKSVLESNNYRQYVAATAERD

Click here to download the sequence:
Link to NCBI Protein BLAST