Transcript Information: R_Transcript_5271.p1


Annotated TAIR IDAT5G13500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4338676-4340827 | Forward length=358
E-Value8.4E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.571580319237
Replicate 214.924397322936
Replicate 320.182693125259
Condition 2: 8 Hour
Replicate 111.051728232946
Replicate 216.196530630913
Replicate 317.366676107073
Condition 3: 24 Hour
Replicate 118.924678930945
Replicate 213.82924341247
Replicate 317.92425545981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5271.p1 GENE.R_Transcript_5271~~R_Transcript_5271.p1 ORF type:complete len:370 (+),score=73.54 R_Transcript_5271:1703-2812(+)
ATGATTGGAAGGAAGAACATGGGGAGGGCTTCACCCTTACTTCTAGTTCTATTGACTCTAGGATTTTTCTTTGCCACTTATAATTTGATAACCATGGTGATCCACAATAGAAGAGTTATTTCCTCTAGTTGGTTAGGGAGTGAGAGTAGGATCTTGATTGACCCTGTGACTGGGATCCCTGATAACTTGAAGGGAACAAATAGGGGCAAAGTGCCCTTCCATGTGGCTTTGACCGCCACTGACGCTCCTTATAGCAAATGGCAATGTCGAATTATGTACTATTGGTACAAGAAGCAGAAGAAGTTGCCTGGATCTGATTTTGGAGGGTTTACTAGGATTCTGCATTCTGGGAGATCCGATGACTTGATGGATGAGATTCCTACTTATGTTGTTGACCCACTTCCAGCAGGTCTGGATCGGGGTTACATTGTATTGAATAGGCCATGGGCTTTTGTGCAGTGGCTAGTAAAGGCTCCAATTGAGGAGGATTTTGTTTTGATGGCTGAACCTGATCACATATTTCTGAGGCCTTTACCGAATTTAGCTCTTGGAGGACTTCCAGCTGCTTTTCCCTTTTTCTACATTAAGCCTGCTGAACATGAAAAGATTGTAAGGAAGTTTTATCCTGAGGAAAATGGCCCTGTCACAAATATTGATCCTATTGGAAACTCACCTGTGATAATAAAGAAGGACTTACTGGCAAAGATTGCACCTACATGGATGAATGTTTCTCTGAAAATGAAAGAGGACCCAGAGACTGATAAAGCTTTTGGATGGGTGCTAGAAATGTATGCATATGCTATTGCATCCGCATTGCACAGTGTGCAACATGTTCTTCGGAAAGACTTTATGCTCCAGCCTCCATGGGATCTTAGTACTAAAGATAGATTTATTCTTCACTACACTTATGGATGCGACTACAATATGAAGGGAGAGCTTACATATGGAAAAATTGGAGAGTGGCGATTTGACAAGAGATCATACCTGCGTGGACCACCACCTAAGAACCTCACCTTACCCCCACCAGGAGTTCCTGAAAGTGTGGTGACCCTTGTTACTATGGTGAATGAAGCTACTGCTAACATTCCGAACTGGGAAAAAGATTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5271.p1 GENE.R_Transcript_5271~~R_Transcript_5271.p1 ORF type:complete len:370 (+),score=73.54 R_Transcript_5271:1703-2812(+)
MIGRKNMGRASPLLLVLLTLGFFFATYNLITMVIHNRRVISSSWLGSESRILIDPVTGIPDNLKGTNRGKVPFHVALTATDAPYSKWQCRIMYYWYKKQKKLPGSDFGGFTRILHSGRSDDLMDEIPTYVVDPLPAGLDRGYIVLNRPWAFVQWLVKAPIEEDFVLMAEPDHIFLRPLPNLALGGLPAAFPFFYIKPAEHEKIVRKFYPEENGPVTNIDPIGNSPVIIKKDLLAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHSVQHVLRKDFMLQPPWDLSTKDRFILHYTYGCDYNMKGELTYGKIGEWRFDKRSYLRGPPPKNLTLPPPGVPESVVTLVTMVNEATANIPNWEKDS*

Click here to download the sequence:
Link to NCBI Protein BLAST