Transcript Information: R_Transcript_52728.p1


Annotated TAIR IDAT4G36740.1
Annotated Gene Namehomeobox protein 40
Annotated Gene Symbol(s)HB-5, ATHB40, HB40
Annotation TypeOrtholog
Chromosome Positionchr4:17314649-17316314 | Reverse length=216
E-Value1.5E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.350414006207
Replicate 251.810315379106
Replicate 353.449054391022
Condition 2: 8 Hour
Replicate 163.48187208545
Replicate 294.723180021689
Replicate 382.438564900924
Condition 3: 24 Hour
Replicate 165.897409635077
Replicate 251.870701464876
Replicate 356.441905141675


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52728.p1 GENE.R_Transcript_52728~~R_Transcript_52728.p1 ORF type:complete len:216 (+),score=46.49,Homeobox|PF00046.25|2.3e-16 R_Transcript_52728:266-913(+)
ATGCAAGATCAATCTGACCTAATCTCTCAGCTTTACCCCGGTTTATACACTCCTACTATGGCTAATGATAATCATCAAGGGGAGCAACAACCAAAACGGCGTCGCAGAAGAAAGAGTAAGGGTGAAGGAAATAGTTCCGCTTTGAAGAAGAGGAAGCTTAGTGCTGAGCAAGTCAACATGTTGGAGATCAACTTTGGGTGTGAGCACAAGCTTGAGTCTGAAAGGAAGGACCGGCTTGCCTCGGAGTTGGGTTTGGATCCGAGGCAAGTCGCGGTCTGGTTCCAAAACCGTAGGGCTCGTTGGAAGAGCAAGAAGCTCGAGGAAGAGTACTCCAAACTAAGAAATGATCATGAGGGTCTTGTTGTGGAGAAATGTCGTCTTGAAACTGAGGTTTTGAATATGAAGGATCAATTGACCGATGCGAAGAAGAAAATTCAGAGCTTATTAGAGAAATTGTCATCATCGACGGACAATATGTCGACTAATAGTCCAACATCTTCATTATCAATGGATCATCATGCTAATGCTATAGAATCTCAATTGCTTGGAGGTCAATTTGGTATGGCAGGTTGCTTTGATAATGTGTTCTATGGTGCTAATAGTGACTATGTGCCTTGTATGGATTGGGTGGATCTTTACAATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52728.p1 GENE.R_Transcript_52728~~R_Transcript_52728.p1 ORF type:complete len:216 (+),score=46.49,Homeobox|PF00046.25|2.3e-16 R_Transcript_52728:266-913(+)
MQDQSDLISQLYPGLYTPTMANDNHQGEQQPKRRRRRKSKGEGNSSALKKRKLSAEQVNMLEINFGCEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLRNDHEGLVVEKCRLETEVLNMKDQLTDAKKKIQSLLEKLSSSTDNMSTNSPTSSLSMDHHANAIESQLLGGQFGMAGCFDNVFYGANSDYVPCMDWVDLYNM*

Click here to download the sequence:
Link to NCBI Protein BLAST