Transcript Information: R_Transcript_52736.p1


Annotated TAIR IDAT5G44790.1
Annotated Gene Namecopper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Annotated Gene Symbol(s)RAN1, HMA7
Annotation TypeOrtholog
Chromosome Positionchr5:18075846-18079817 | Reverse length=1001
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.623944070587
Replicate 239.890889889042
Replicate 358.027374921472
Condition 2: 8 Hour
Replicate 147.030333268346
Replicate 264.046529753247
Replicate 378.938818039899
Condition 3: 24 Hour
Replicate 156.154477936545
Replicate 238.514733563129
Replicate 356.921047669394


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52736.p1 GENE.R_Transcript_52736~~R_Transcript_52736.p1 ORF type:complete len:1009 (+),score=238.48,E1-E2_ATPase|PF00122.16|7.8e-61,E1-E2_ATPase|PF00122.16|4.3e+02,E1-E2_ATPase|PF00122.16|6.9e+03,Hydrolase|PF00702.22|2.2e-44,HMA|PF00403.22|1.1e-13,HMA|PF00403.22|3.2e-13,HMA|PF00403.22|15,HAD|PF12710.3|6.7e+02,HAD|PF12710.3|6.3e-11 R_Transcript_52736:220-3246(+)
ATGGCGCCGAGCGTGAAGGACCTCCAGCTGACGTCACCTCGGCGTCACAAGAAGCCGGTGTTTTCTATCGGTGAAGATGAAGACGAGCTCGAGAATGTTGGTTTGCTCGACGATTACGATGAGGAATCTGGTAAGGAGGGTCTGGGGCTTCTTAATCGTAACCCTAATACGAAGAGAATTCATGTCAGCGTTACGGGTATGACTTGTGCTGCTTGCTCTAATTCCGTTGAATCAGCTCTTCTTGCCGTTAATGGTGTCCTCAAAGCTTCCGTTGCTTTGCTTCAGAATAAAGCTGACGTCATCTTTGACCCTGATTTGGTCAAGGATGAAGATATTAAAAATGCTATAGAAGATGCTGGGTTTGAGGCAGAAATTTTGTCGGAACCAAGTACCTCTTCTTCAAAGCTGAATAAAACAATGTCAGGTCAGTTTAATATCGGGGGTATGACTTGTGCAGCGTGTGTAAACTCTGTTGAAGGTATTTTGAGGGAGCTACCTGGGGTCACTAGAGCGGTGGTTGCTTTGACTACTAACTTGGGAGAAGTTGAATATGATCCTAATGTTATTAGCAAGGATGATATAGTTAATGCTATTGAAGATGCTGGCTTTGAGGCTTCCCTTGTACAGAGCAGCGAGCAGGACAAAATTATTCTTGAGGTTAATGGGGTTTCTGCGGAGATAGATGCACAGTCTTTGGAAAGTTTGCTTTGCCAAATTAAAGGGGTGGGGCAATTTCGTTTTGACAGGGCATCTAGACAGCTGGAAGTTTGCTTTGATCCTGAAGTAATTACTTCTCGGTCCTTGGTTGATGGTGTAGAGGATGCAAGTGGTGGGCGATATAAATTACGTGTAAAAAGCCCTTTTGCAAGAATGACTTCTAAAGACTCAGAAGAATCCTCAAAAATGTTCCATCTATTTACATCCAGTCTGTTTCTTAGTGTCCCTGTATTCCTGATACAAGTCTGCCCACATGTACCTGTGCTATATCCTTTTCTTTTGTGGCGATGTGGACCTTTCTTAATGAGAGATTGGCTGAAATGGGGTTTGGTGAGTGTTGTTCAGTTTGTTGTTGGGAAGCGTTTCTATGTGGCAGCTGGCAAGGCACTAAGGAGGGGATCAACAAACATGGATGTCTTAGTTGCACTGGGAACATCAGCTTCCTATTTTTATTCAGTTTATGCGCTTCTATATGGTGCTGTAACTGGTTTTTGGTCTCCAACATACTTTGAAACAAGTTCTATGCTGATAACATTTGTCTTGTTGGGAAAGTATTTGGAGTCACTTGCAAAGGGCAAAACATCTGATGCTATCAAGAAACTAGTGGAACTTGCACCTGCTACAGCTTTGCTGCTTGTGAAAGACAAAGGTGGAAAGTGTGTTGATGAACGAGATATAGATGCTTTGCTTATTCAACCTGGTGATCTCTTGAAGGTTCTCCCTGGTACTAAAGTTCCAGCAGATGGTACTGTGTTGTGGGGTTCAAGTTATGTCAATGAGAGCATGGTCACTGGTGAATCTGTCCCTGTCTTGAAAGAAATCAATGCACCTGTAATTGGGGGAACTATGAATTTGCATGGGGTCCTGCATGTTCAGGCAACCAAAGTGGGATCTGATACAGTTTTGAGCCAGATTATAAATTTGGTTGAGACTGCACAGATGTCTAAAGCACCAATACAGAAGTTTGCAGACTATATTGCAAGCATATTTGTTCCAACTGTTGTTGCTATGGCGTTGTTGACGTTATTGGGTTGGTACATTGGTGGAGTGTCTGGCGCTTATCCTCAGAGTTGGCTGCCTGAAAATGGAAATTATTTTGTGTTTTCTCTGATGTTTGCGATATCAGTTGTGGTAATTGCATGCCCATGTGCTCTGGGATTGGCTACACCAACAGCTGTAATGGTTGCAACTGGGGTGGGTGCCAAAAATGGCATCTTGATAAAAGGAGGAGATGCATTGGAAAGTGCTCAAAAAATTAAGTATGTCATATTTGACAAGACTGGTACCCTTACACAGGGAAAAGCTACAGTTACAACTGCTAAAGTATTCACTGGCATGGATCTTGGAGAATTCCTCACCTTGGTGGCTTCTGCTGAGGTTAGTAGTGAACATCCTTTGGCAAAAGCAGTGGTTGAATATGCTCGGCATTTTCACTTCTTTGACCCTTCTGAAACCAAGGATTCACTGAATGACAACAAAGATTCGCGATATTCTGGTTGGCTTTTGGATGTCTCAGATTTCACTGCTGTTCCTGGGAGAGGAGTCCAATGTTTTATAGATGCAAAGCGTGTTTTGATTGGTAACCGAAGACTGCTTATTGAGAATGGGGTGACAATACCCACACATGTTGAAAGTTTTGTGGTGGAGCTGGAAGAGAGTGCTAAGACTGGAGTTCTTGTTGCTTGTGATGATGTTCTAATTGGAGTCTTGGGAGTAGCAGATCCTCTGAAGAGAGAAGCTGCTGTTGTGGTGGAGGGGCTTGAAAAGATGGGGATCAGACCTATAATGGTTACTGGGGATAACTTGCGAACAGCGCAAGCTGTCGCAAAAGAGGTTGGAATACACGATGTGAGGGCTGAAGTAATGCCAGCCGGGAAAGCGGAAGTTATTTGTTCATTTCAGAAGGATGGAAGCATTGTGGCAATGGTAGGTGATGGCATTAATGACTCGCCTGCCCTTGCTGCTGCAGATGTTGGTATGGCCATTGGTGCAGGAACAGATGTTGCCATTGAGGCAGCAGATTACGTCTTGATGAGAAATAATTTAGAAGATGTAATCACGGCCATTGATCTTTCAAGGAAGACCTTCTTGCGAATCCGATTGAACTACATATTTGCCATGGCTTACAATGTAGTTGCCATTCCAGTTGCTGCCGGTGTTTTCTATCCTTTGATAGGGTTGAAGTTGCCACCTTGGATGGCTGGTGCTTGCATGGCTCTCTCTTCAATTAGTGTTGTTTGCTCTTCTTTGCTTCTTAGGACGTATAAAAAACCAAGTCTTACGTGTATACTAGAAATAACTGTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52736.p1 GENE.R_Transcript_52736~~R_Transcript_52736.p1 ORF type:complete len:1009 (+),score=238.48,E1-E2_ATPase|PF00122.16|7.8e-61,E1-E2_ATPase|PF00122.16|4.3e+02,E1-E2_ATPase|PF00122.16|6.9e+03,Hydrolase|PF00702.22|2.2e-44,HMA|PF00403.22|1.1e-13,HMA|PF00403.22|3.2e-13,HMA|PF00403.22|15,HAD|PF12710.3|6.7e+02,HAD|PF12710.3|6.3e-11 R_Transcript_52736:220-3246(+)
MAPSVKDLQLTSPRRHKKPVFSIGEDEDELENVGLLDDYDEESGKEGLGLLNRNPNTKRIHVSVTGMTCAACSNSVESALLAVNGVLKASVALLQNKADVIFDPDLVKDEDIKNAIEDAGFEAEILSEPSTSSSKLNKTMSGQFNIGGMTCAACVNSVEGILRELPGVTRAVVALTTNLGEVEYDPNVISKDDIVNAIEDAGFEASLVQSSEQDKIILEVNGVSAEIDAQSLESLLCQIKGVGQFRFDRASRQLEVCFDPEVITSRSLVDGVEDASGGRYKLRVKSPFARMTSKDSEESSKMFHLFTSSLFLSVPVFLIQVCPHVPVLYPFLLWRCGPFLMRDWLKWGLVSVVQFVVGKRFYVAAGKALRRGSTNMDVLVALGTSASYFYSVYALLYGAVTGFWSPTYFETSSMLITFVLLGKYLESLAKGKTSDAIKKLVELAPATALLLVKDKGGKCVDERDIDALLIQPGDLLKVLPGTKVPADGTVLWGSSYVNESMVTGESVPVLKEINAPVIGGTMNLHGVLHVQATKVGSDTVLSQIINLVETAQMSKAPIQKFADYIASIFVPTVVAMALLTLLGWYIGGVSGAYPQSWLPENGNYFVFSLMFAISVVVIACPCALGLATPTAVMVATGVGAKNGILIKGGDALESAQKIKYVIFDKTGTLTQGKATVTTAKVFTGMDLGEFLTLVASAEVSSEHPLAKAVVEYARHFHFFDPSETKDSLNDNKDSRYSGWLLDVSDFTAVPGRGVQCFIDAKRVLIGNRRLLIENGVTIPTHVESFVVELEESAKTGVLVACDDVLIGVLGVADPLKREAAVVVEGLEKMGIRPIMVTGDNLRTAQAVAKEVGIHDVRAEVMPAGKAEVICSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTFLRIRLNYIFAMAYNVVAIPVAAGVFYPLIGLKLPPWMAGACMALSSISVVCSSLLLRTYKKPSLTCILEITVE*

Click here to download the sequence:
Link to NCBI Protein BLAST