Transcript Information: R_Transcript_52741.p1


Annotated TAIR IDAT1G55325.2
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)GCT
Annotation TypeOrtholog
Chromosome Positionchr1:20637594-20647714 | Forward length=2001
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5767007736568
Replicate 24.4754990178545
Replicate 36.2377347661119
Condition 2: 8 Hour
Replicate 15.9060755329153
Replicate 26.8416772589043
Replicate 39.8487066293176
Condition 3: 24 Hour
Replicate 18.7569810333109
Replicate 25.5447438210375
Replicate 38.8287477854849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52741.p1 GENE.R_Transcript_52741~~R_Transcript_52741.p1 ORF type:complete len:1961 (+),score=444.57,Med13_C|PF06333.8|96,Med13_C|PF06333.8|0.0067,Med13_C|PF06333.8|4.6e-13 R_Transcript_52741:170-6052(+)
ATGTGGACAAACATTTTCAGAATTGGAGGCCTCAATCAGCTGTCTTGGTTCCAGTTTCTCCCAAATGATTCTGATTTATCGTCATTGCCAGATAAAAGTGTTAAAGCAGAACAGAGAGATGCTGCCACATTTGAGGTTCTAAGTTCGCATCTGCAGCTGCAGAAGGAAGGATTTCTCAGCACATGGACAAACTCCTTTGTGGGTCCTTGGGATCCTTCTCAGGGAATGCACAATCCTGATGAGAAAATTAAGCTTTGGCTTTTTCTTCCTGGGCGCCATTCCTCCGTTGCTGAGACTGCACTGCAAGCAGTATCCAGATTAAGAGTTGTTGCCTCTGGGTTCTGGGTTTCTCCTGGCGATTCAGAAGATGTTGCTACTGCTTTATCACAGGCTCTGAAAAACCGGATAGAAAGAGCACTTACAGGGCTCTCTTATGTGAGATTTGGAGATGTATTTTCAAGATATCGTCCATGTTCACAAAGTGAAGAACTCTTCAGGAAAGGTCATTCGGCAATTGAATTCGTCTTCGCTGCCACGGAAGAGGCCATATTTGTGCATGTTATATTATCGGCCAAGCATGTACGCACACTCTCTGGTGGTGATGTGGAAAGAGTGCTAAAAGCCTCCACGAGTGGTTTGGACCGGAGACTTCCAGTCATTGTTTCTCCTCATGGGATGCGTGGCAAAATCACTGGATGCTGTTTGAGCGATCTTGTGAAGCATGTGTACTCTGGGTCTGGCAAGTCAAGAAATTCTACCGGATTAGTAGGTTTACCATACCCTGTTTCTCAAGCTTCTGGTTGCACCTTGCGGGGACAGAATTGCTATATCGAAGTTACCCTTGGTTGCAGTGTTTCTGTTAATGATAAGCAAAATGAGCCTAACTCAAATCTAAACAAGCGCAACCATGCAACATCTGACACTCCTTTGGTTGTTAGAGGCGAGCAGAAAGGATCTATGGAGGACACATCTGTTTGCGAAAAGACATTTATATATCCTACTGAGGCAGTTCTTGTTCCTGTCTTGCAAACATCCAATGCACAGTCGTCCTTGAAGAGATTTTGGCGACAAAATTGGGGAGGGGTGTCATTGCCTAGTTCTACCGCCTTTATGCATTGCAGCGGCACTGAGGCAGATAATGTGGATGATTCGTGGTCAGAATCTGATGGGATTTGCTTGCAGAATGGCCTTAAAAGTAGAAGCAATAGCAACAGTAGTAGCATCAGTAGCTTAAGTAGCAGTTCAAGTGATAGTGATTGTAAAACAAAAGGAACATCTGGTGACCTTGAAGCTGATGCTGATTCTTTAATTGGTAGACAATCTGCCTTACCATCTGTGAACACCATGGAGCTCAGTGGTCCTAAGCAGGGGGCAAAACGTGCCCGGACTGGAATAGAAGACTCATTTATTCAACCTGGTAGCATGATAAATGCTCCTGCGCAAGATCACAGCAATTCAGGCATCACAGGGGTTGGAAATGATCAAGTTGCATCCTATTGGGACTGGGATGATGATGAGAGAGGTGTGGGCATGGATATTCAAGCACTTCTTTCTGAGTTTGGGGATTTTGGTGACTTCTTTGAAAATGATGCCTTGCCATTTGGAGAGCCCCCAGGAACTGCAGAGTCTCAGGCATTTGTTTTTTCTGGGCAAGACTGTGGAGATGGAAGTGGTAGTCCCACTGCTGGTGTGATGGATGTTTCAGATCCAATGCTTTTACCTGTTGGTTTTCCATCATTTGAAAGCTTCAATCGCTCACCAACAATCATGGATGAGGGCATCGGTACTGTTCAAGAAGCCACAAAAAGTACGTCGTCATCAGCTCCTGTGAGTTGTGTAGCAGCTTGTTTGAAAGGGGAGTTTGACCATGTAATGAAGGCTGAAGCATTGTTGACTTTTGCCCCAGAATACGGAGCAGTTGATACCCCTGCACGTGAGCTCTCATCAACTATCTTTAGAAGTCCGTACCAGCCAAAATCTCAAAATACAGATAGTTTGAATTCAAGTGGGAACAATTATGTCTATGGGGCAACACCACCTTCATCGCCTACAACTAATGGAGCTGGTGAAAAGCCTGGTATGGTTGTTGATTCTGGAATACATGCCGGAAAACCTGATGTTGGTTATGTTTTCCAGAAATTTTATACTCAGGTGGAAAGCAGTGAAAGTTTGGTGGATAAAAAGTCTGTTATGCACCATAAGCCAGTTAGTTCATCTGAGGGATCATCATTATCTTTGATTTCTGGTTTCAACTCTACAGCTACGGTTAAATCTGTCGAGAACATGACAAGTGAAGTTGTCAACAGTGCCAAGAGTCTCCTATGTCAAACAACTGTCCCTGCAGCTGAACTTGAATGCCTTATTTTCCAGGCTTCAATGTGCAGGATACGGCATAACCTATTATCTATCGTTAGTAACACCTCTGCTGCGTGGAACAGATTGATGGGAAACACTGTATTAAGTCAAGTGCCCGGTGACCCGAGCAGCATGATAGACAATCTGTCTAGCAAATATGAAGTGAAGAAGGAGTCTATACCAGTTAGAATTGCCGGTGATATGGACGGAGGGATGCTGGATGGTCCTTTCAATGCACCAGTTGGTGTTTGGCGCTCTGTTATGGCGCCTAAATCTGCAAAACCTGTTAATACACCTACCACCGAGGTCTTTTCTTTGTCTCATTCATTTAATGAGGAAAACATGGCTTCATATGGGCAGAGACAGTCGATTCAAGATTTTATTGATTCCATACCATTGCTTGTTCAACAAGCTGCCTCATTTGTTGATGTGGCATTGGATGGTGAATGTGCTGATGGTCTGTATGGCTGGCTTGCTTCGCAAGAGCAGTGTAGGCGTGGATTTTGCTGTGGGCCACATATGGTTCATGCAGGTTGTGGGGGTGTTTTAGCTTCTTCCCATTCTCTTGACATTGCGGGTGTGCAGTTACATGATCCCATTACAACTAATATTCAGGCCTCATCCATGATTGGTTTATTGCACTCTGATGTGAAAACAGCATTGAAATCTGCATTTGGCTCTTTGGATGGTCCCTTATCTGTTGTTGATTGGTGCAATGGTCGTCAATCAGGAGATGCAGGAACCATCAGTGAAGCATTATCTGCAGAATCCACTGTAAGCGAATATAGAGAGTCTTCTAATAGTGTGATAACAACTGTTGGGAATCCAACCAGTCCTTCACAACACTCTGGTGGTGTATCATCTGGTTTGAGAGATGGAAGTAAAGTGGACGACACCTGCCAAAGAAGGTCAAACCAGGAGCTCTGTATGTCAGAGTCAGATCAGCAGCTGGGGTCCCGGAGGAGGCCGAATCTGTTTGTAGTTCCATATCCTTCTATTCTTGTTGGGTACCAGGATGATTGGCTAAAGACATCAGCGAGTTCCTTACAGATGTGGGAGAAAGCTCCTCTTGAGCCTTATGCTTTCCAGAAACATATGTCTTATTATGTTGTTTGTCCAAATATCGATCCCCTTACTTCAGCTGCTGCTGATTTTTTTCAACAACTAGGAACTGTTTATCAGATGTGCAAATTGGGCACCCATTCACCTCAAAGCATAGGAAATCAAATGGAAATAGATTCTGGGAAGTGTTCCACTTCTGGCTTTGTTATGCTTGATAGCCCACATTCAATAAAGAGAGAAAGTAACACTGGTTCCCTTGTGGGATCAATAAGTGACTATTTTCTTTCTTTATCCACTGGTTGGGACCTACCTGGCTTTCTCAAGTCTCTTACAAAGGCTCTCAAAACCTTACAACTTGGTTCAGGCTTGACTACAAATGCAAAGGAAGGGCATAGCAGTCCATGTACTGTGATCTATATTGTGTGCCCCTTTCCTGATCCAACTGCTGTTCTTCGGACCATTGTCGAATCATCTGTTGCTGTTGGGTCGATATGTTCTTCATCTGAGAATGATAAGAGGTCATCACTGCAGAGTCAGGTGTGGAAAGCATTAAGTTATGCAGCAGGTGTTGATGAAGCATCTATATCAAATGTGCCAGCGCTTTCTGGGTTCAGTATTCCTAGATTAGTCCTGCAAATTGTTCCTGTAGATGCCATATTTCGGGTTACAAGTCCAAGTTTCAATGAACTTGTTGTGCTTAAGGAGATTGCTTTTACAGTTTACAACAAGGCTAGATGTATATCACGAGGATCCTCCAGTGATGTGGTTCAGTCATCAAGCTTCTCCGGTAGACCTCATTCTTTAATGATGCACATGACAAATCCAATTCCTGGTATGTGGAAAGACTGTGTTGGTTCCAGAATTTCAGGTCCTTCACTCCCAAGGGAAGGTGAGCTTGATCCAGGCTTGAGGACTGGAATGTGGGATAATACTTGGCAAACTACAAGGACGGGTAGTTTAGGTTGTGACACAAACCGAAGTGGGGAGTTGCTTTTGCAGGATGAGCTTCATTACATGTTTGAACCACTTTTTATTTTGGCTGAACCGGGATCAGTGGAGCAGGGAGTTTCACCTTCATTTATTGGTAATATAGCCATGGATTTCACGAAGCAAGCTTCTGATGATAACAGTGGTTTTTTGCATAGCTCCACTTCCACAGCATGTGGAGATGCTGGAACTGGCTCCCAATTTGATGGGTCAGAGGTAGATGGCTATGGGTCTGGCCAACAAACGCCGCCCTCTACCCTACATTGCTGCTATGGTTGGACAGAAGATTGGCGTTGGCTGGTGTGTATATGGACTGATTCGAGAGGAGAATTGCTGGACAGCCATATTTTTCCTTTTGGTGGCATTAGTAGTAGGCAGGACACAAAGGGCATGCAGAACCTTTTTGTCCAAGTTCTTCAGCAAGGTTTTCAAATACTGCAGGCTGCTTCTCCTGATAATGCTGTCTGTAGACCAAGAGATTTTGTTATTACACGCATTGGGTGCTTTTATGAGCTTGAATGCCAAGAGTGGCAAAAAGCACTGTATTCAATTGGTGGGTCCGAGGTAAAGAAGTGGCCAGTGCAACTACGCCGAGGTGCTCCGGATGGAATGGCCATGAGCAGCAATGGAGCTTCCTTGCAGCAGCAGGAAATAGAGAGAAGCTTACCTTCTTCACCTGGTCCTTTGTACAGTGCCCACACAAAATCTTCTGGATTTATGAAAGGAGGATTGGGACAAACTAGTGGTAGAAAGCAGCTTCTAGGCGGAGCTGCAATTGTTGATGGCTCAAAGTCATTGCAGTGGGCACAAAGCATCAGCTTTGTTTCGATATCGGTTGATCATTCTTTGCATCTTGTTTGCCAAGCTGATGTCTCGACTGGTGTCACTCAAGGCGGTGGGTTTTTGAGCTCTTTGAATTACCTAGAAGGTTTCAGCCATGTTAAGTCCCTTGGGCCCACACCAGCATCATACATTTTGATTCCTTCTCATAGCATGCGTTTCCTTACTCCCACTCCTCTTCAGCTTCCAACATGCCTGACTTCTGAATCGCCTCCTCTGGCTCATCTCCTTCACAGTAAAGGCTATGCAATTCCGTTCTCAACAGGTTTTGTGGTCTCTAAAGCAGTTCCATCACTTAATAAAGCTCACCACAATGTAAAAGATGAATGGCCTTCAGTTCTTTCAGTTAGTCTTGTTGATTATTATGGCGGATTTGGGTTTCCAAATGAAAAACATGGAAGGGCAATTCCAAAGCAGGGAGGAAGATGCATTGTTTCAGATGCCAGGGAGTATGAACTTGAGATTCATATGATTCTTGAATCTCTTGTTGCAGAGCTACATGCTCTGTCATGGATGACTGTGAGCCCTGCATATATGGAGAGACGTAGTGCACTGCCTTTTCACTGTGACATGGTATTAAGGTTGAGAAGACTGCTTCATTTTGCTGAGAAGGAGATCTCTTGTCAGCCTGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52741.p1 GENE.R_Transcript_52741~~R_Transcript_52741.p1 ORF type:complete len:1961 (+),score=444.57,Med13_C|PF06333.8|96,Med13_C|PF06333.8|0.0067,Med13_C|PF06333.8|4.6e-13 R_Transcript_52741:170-6052(+)
MWTNIFRIGGLNQLSWFQFLPNDSDLSSLPDKSVKAEQRDAATFEVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGMHNPDEKIKLWLFLPGRHSSVAETALQAVSRLRVVASGFWVSPGDSEDVATALSQALKNRIERALTGLSYVRFGDVFSRYRPCSQSEELFRKGHSAIEFVFAATEEAIFVHVILSAKHVRTLSGGDVERVLKASTSGLDRRLPVIVSPHGMRGKITGCCLSDLVKHVYSGSGKSRNSTGLVGLPYPVSQASGCTLRGQNCYIEVTLGCSVSVNDKQNEPNSNLNKRNHATSDTPLVVRGEQKGSMEDTSVCEKTFIYPTEAVLVPVLQTSNAQSSLKRFWRQNWGGVSLPSSTAFMHCSGTEADNVDDSWSESDGICLQNGLKSRSNSNSSSISSLSSSSSDSDCKTKGTSGDLEADADSLIGRQSALPSVNTMELSGPKQGAKRARTGIEDSFIQPGSMINAPAQDHSNSGITGVGNDQVASYWDWDDDERGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQAFVFSGQDCGDGSGSPTAGVMDVSDPMLLPVGFPSFESFNRSPTIMDEGIGTVQEATKSTSSSAPVSCVAACLKGEFDHVMKAEALLTFAPEYGAVDTPARELSSTIFRSPYQPKSQNTDSLNSSGNNYVYGATPPSSPTTNGAGEKPGMVVDSGIHAGKPDVGYVFQKFYTQVESSESLVDKKSVMHHKPVSSSEGSSLSLISGFNSTATVKSVENMTSEVVNSAKSLLCQTTVPAAELECLIFQASMCRIRHNLLSIVSNTSAAWNRLMGNTVLSQVPGDPSSMIDNLSSKYEVKKESIPVRIAGDMDGGMLDGPFNAPVGVWRSVMAPKSAKPVNTPTTEVFSLSHSFNEENMASYGQRQSIQDFIDSIPLLVQQAASFVDVALDGECADGLYGWLASQEQCRRGFCCGPHMVHAGCGGVLASSHSLDIAGVQLHDPITTNIQASSMIGLLHSDVKTALKSAFGSLDGPLSVVDWCNGRQSGDAGTISEALSAESTVSEYRESSNSVITTVGNPTSPSQHSGGVSSGLRDGSKVDDTCQRRSNQELCMSESDQQLGSRRRPNLFVVPYPSILVGYQDDWLKTSASSLQMWEKAPLEPYAFQKHMSYYVVCPNIDPLTSAAADFFQQLGTVYQMCKLGTHSPQSIGNQMEIDSGKCSTSGFVMLDSPHSIKRESNTGSLVGSISDYFLSLSTGWDLPGFLKSLTKALKTLQLGSGLTTNAKEGHSSPCTVIYIVCPFPDPTAVLRTIVESSVAVGSICSSSENDKRSSLQSQVWKALSYAAGVDEASISNVPALSGFSIPRLVLQIVPVDAIFRVTSPSFNELVVLKEIAFTVYNKARCISRGSSSDVVQSSSFSGRPHSLMMHMTNPIPGMWKDCVGSRISGPSLPREGELDPGLRTGMWDNTWQTTRTGSLGCDTNRSGELLLQDELHYMFEPLFILAEPGSVEQGVSPSFIGNIAMDFTKQASDDNSGFLHSSTSTACGDAGTGSQFDGSEVDGYGSGQQTPPSTLHCCYGWTEDWRWLVCIWTDSRGELLDSHIFPFGGISSRQDTKGMQNLFVQVLQQGFQILQAASPDNAVCRPRDFVITRIGCFYELECQEWQKALYSIGGSEVKKWPVQLRRGAPDGMAMSSNGASLQQQEIERSLPSSPGPLYSAHTKSSGFMKGGLGQTSGRKQLLGGAAIVDGSKSLQWAQSISFVSISVDHSLHLVCQADVSTGVTQGGGFLSSLNYLEGFSHVKSLGPTPASYILIPSHSMRFLTPTPLQLPTCLTSESPPLAHLLHSKGYAIPFSTGFVVSKAVPSLNKAHHNVKDEWPSVLSVSLVDYYGGFGFPNEKHGRAIPKQGGRCIVSDAREYELEIHMILESLVAELHALSWMTVSPAYMERRSALPFHCDMVLRLRRLLHFAEKEISCQPDK*

Click here to download the sequence:
Link to NCBI Protein BLAST