Transcript Information: R_Transcript_52752.p1


Annotated TAIR IDAT1G34770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12746624-12748449 | Forward length=237
E-Value3.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.144577460088
Replicate 211.679614057941
Replicate 314.21543522848
Condition 2: 8 Hour
Replicate 111.888635392392
Replicate 215.242787621644
Replicate 313.949308483191
Condition 3: 24 Hour
Replicate 116.535526749215
Replicate 213.757942844926
Replicate 314.709100577368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52752.p1 GENE.R_Transcript_52752~~R_Transcript_52752.p1 ORF type:5prime_partial len:311 (+),score=49.16,MAGE|PF01454.15|2.5e-40 R_Transcript_52752:3-935(+)
CCAATAAACCCCTTTATTTTTTCCCGCTTCGTCCTCTCATATTCAGCCTCACCTGGCCCCGGCACCAGCAGCACTCAGCGCCTCACACTCACCGGGGATACCACTGCCGGCGGCTTCAGGCGCCACTCCTTCACTCAGCGCAGCACAGAAGCACTTCAACGTCTTTTTCTCACCCCAGCCCATCACCAATTGCTATACCTCCCCCCCAGAAATTTTGCTTCAGGAATGGGTGCAAGTGGTGAAGATTTTTCTCAGTTTGACTTGTCCACAGAGGAGAAGGACCGACTTGTTGCTGAAGTAGTTCGCTATGTGCTTTTCAAAACCCACCAGAGCTCTGGATGCCCTATCAAAAGGGAGGAGCTTACCCAAATTGTGACCAAGAATTATCGACAACGAGCTCTCCCTTCTGCCGTTATCAATGAGGCCAAAGCGAAGCTTGCAAATGTTTTTGGCTATGAATTGAAGGAACTACAGCGTTCTCGTCCTTCCACAAAAAACCAATCTCGCTCCTCCCAACTCAGTGCTGCTGATGCCAAATCGTATATTATATTAAGTCAACTGCCTTCTGAAGTGTATCGCAAGTATGTTGAGGATATAAATACTGCACACCTTACTGGATTTACTTTTGTTATTGTTAGTATTGTGCACCTTGCTGGAGGAAAAATTTCAGAAGAAAATCTATGGCACCATCTGAGAAGGCTGGGGTTGCAAGAAACTGATGAAAGCCATCCGGTCATAGGAAATGTCAAGCTCTCACTGGAGGCACTTGTGCAGCAAAGATATCTCCAGAAGGATAAGGTTAATGGCCCGGAAGGACATACTGTTATGTATGAGCTTGCTGAGAGAGCATTAGATGATGAACTTAGTCAAAAAGTTAAAGACAACATAGCACAGGTACATTGCATCACTTTTACCTTATTATTGCTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52752.p1 GENE.R_Transcript_52752~~R_Transcript_52752.p1 ORF type:5prime_partial len:311 (+),score=49.16,MAGE|PF01454.15|2.5e-40 R_Transcript_52752:3-935(+)
PINPFIFSRFVLSYSASPGPGTSSTQRLTLTGDTTAGGFRRHSFTQRSTEALQRLFLTPAHHQLLYLPPRNFASGMGASGEDFSQFDLSTEEKDRLVAEVVRYVLFKTHQSSGCPIKREELTQIVTKNYRQRALPSAVINEAKAKLANVFGYELKELQRSRPSTKNQSRSSQLSAADAKSYIILSQLPSEVYRKYVEDINTAHLTGFTFVIVSIVHLAGGKISEENLWHHLRRLGLQETDESHPVIGNVKLSLEALVQQRYLQKDKVNGPEGHTVMYELAERALDDELSQKVKDNIAQVHCITFTLLLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST