Transcript Information: R_Transcript_52766.p1


Annotated TAIR IDAT5G11600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3733815-3735015 | Reverse length=242
E-Value9.1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.828670784159
Replicate 266.149634644896
Replicate 360.592015576919
Condition 2: 8 Hour
Replicate 149.498307635291
Replicate 265.03890901119
Replicate 348.209116378877
Condition 3: 24 Hour
Replicate 149.495057517792
Replicate 255.612453869251
Replicate 348.600118471444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52766.p1 GENE.R_Transcript_52766~~R_Transcript_52766.p1 ORF type:complete len:186 (+),score=51.78 R_Transcript_52766:409-966(+)
ATGGCAAGTGCAGCTGTGAAGAAACTCATTAATAATCAAGCAGGTCCTTCAAAGGGGAAGGTTGATGTCAAACCAATTCTAAAAAAGACAATTGAAAGTAGTTCAACCAAACAGCAATCAGCTATATCTTCAAAACCTCAGGACAAAGGGAAATCAACTACACCGACGACGTCAACAGGGACGAAGCCCAAAAGACAGAAGAAGGTTTACAGTTTGCCAGGACAAAAATATGACGTTCCTGAAGAGAGAGAACCTTTGAGGATATTTTACGAATCGTTGTCAGAACAGATACCCACAAGTGAAATGGCTGAATTTTGGTTGATGGAACATGGAATGTTGTCTCCTGAAAGAGCCAAGAAGGCCTTTGAGAAGAAGCAAAGGAAGCAGAAACAACTTAGGATGGGAACTCCGATAAAATCTCCTCCAACAACTAGTAGACCCGAGAGTTCCAATAAGCAAAAGCTAGCATCAAAGAATGGCGACATAAAAGCCAAGAAAAGAATTGTTGAAGACAGTGATGATGAATTCATTGGGAGCCCAAAAAGAAGAAAGGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52766.p1 GENE.R_Transcript_52766~~R_Transcript_52766.p1 ORF type:complete len:186 (+),score=51.78 R_Transcript_52766:409-966(+)
MASAAVKKLINNQAGPSKGKVDVKPILKKTIESSSTKQQSAISSKPQDKGKSTTPTTSTGTKPKRQKKVYSLPGQKYDVPEEREPLRIFYESLSEQIPTSEMAEFWLMEHGMLSPERAKKAFEKKQRKQKQLRMGTPIKSPPTTSRPESSNKQKLASKNGDIKAKKRIVEDSDDEFIGSPKRRKG*

Click here to download the sequence:
Link to NCBI Protein BLAST