Transcript Information: R_Transcript_52770.p3


Annotated TAIR IDAT1G50140.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18569921-18578663 | Reverse length=1003
E-Value3.5E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6593600867926
Replicate 20.76350183331993
Replicate 32.0824306905593
Condition 2: 8 Hour
Replicate 12.0775885409784
Replicate 20
Replicate 32.3102049880493
Condition 3: 24 Hour
Replicate 11.6696587074694
Replicate 20.53467294280187
Replicate 32.1224440908506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52770.p3 GENE.R_Transcript_52770~~R_Transcript_52770.p3 ORF type:3prime_partial len:165 (+),score=37.73,AAA|PF00004.25|3.8e+03,AAA|PF00004.25|3.8e-17 R_Transcript_52770:1058-1549(+)
ATGCGCTCCTCGTGCTCAATGTTCTTGTTCCGTTTTTTTATTGTCATGGACAGCCTTGAGGTTGCAATTTCAAGGTTGAAAGAGCAAGAAACAGTAACGAAAAAGCCGTCGCAGAATTTAAAGAACCTTGCTAAGGACGAGTATGAGAATAATTTTGTTTCAGCGGTAGTTCCTCCCGGTGAAATTGGTGTCCGGTTTGAGGACATAGGTGCTCTTGAAGATGTAAAGAAGGCATTAAATGAACTGGTTATTCTTCCTATGAGGAGGCCAGAGCTTTTCTCCCGTGGAAATTTGCTGCGGCCTTGCAAAGGAATTTTGCTATTTGGGCCACCAGGAACTGGGAAAACTCTTCTTGCGAAAGCACTTGCGACAGAAGCAGGGGCAAATTTTATTAGCATCACTGGTTCAACTTTAACTTCAAAGTGGTTTGGGGATGCTGAGAAGCTGACAAAGGCTCTCTTTTCCTTTGCTAGCAAGCTGGCCCCTGTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52770.p3 GENE.R_Transcript_52770~~R_Transcript_52770.p3 ORF type:3prime_partial len:165 (+),score=37.73,AAA|PF00004.25|3.8e+03,AAA|PF00004.25|3.8e-17 R_Transcript_52770:1058-1549(+)
MRSSCSMFLFRFFIVMDSLEVAISRLKEQETVTKKPSQNLKNLAKDEYENNFVSAVVPPGEIGVRFEDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVI

Click here to download the sequence:
Link to NCBI Protein BLAST