Transcript Information: R_Transcript_52787.p1


Annotated TAIR IDAT5G47660.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19313008-19314636 | Forward length=398
E-Value5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2692540665143
Replicate 24.4672979609145
Replicate 35.361151352291
Condition 2: 8 Hour
Replicate 14.4655072852119
Replicate 23.8061075474358
Replicate 34.7447979129279
Condition 3: 24 Hour
Replicate 15.0939815429252
Replicate 26.3685398012305
Replicate 34.4573745107055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52787.p1 GENE.R_Transcript_52787~~R_Transcript_52787.p1 ORF type:complete len:329 (+),score=91.03 R_Transcript_52787:184-1170(+)
ATGGAAGACGTGTTGTCTTGTGTTGAGCTGGAGGAGGAGCTTAGTCCTTTCCCTGAGCCTGAGGCTGAGGCCTCTGCTGGTAGTGGTGATGGTGGTGGTTGTGGCGGAGTATTATCGTACCCTCACCCTGAATCAGCTGGTCTGAGTTGTTCCATTCCAGCACAGAAGCTCCGTCCCATCCGGTCCAATGCTAATAAATCCAACCCAAACCCAAAGGCAAAGGCGGAGGAGTTTAATAATGAGGATGAAGATGAGCTATCGGCGATGCAGCTTGTGAAGATCAAGTCAGAAATGGATGCCCACTTCATTTCTACTCTCAAGTCTCAATTTTCTCATCTCCTTGATTTGCCCTTCTCCTCCTCTTTTAGTTACTCATCAGATGGCAGTGGTGAATCAGCTGCTGCACCAAACCAATCAGAGTATAGGAAGCGTGTCAAAAGAAACAAGAGGAAGAAGGTGGAGTTGTTTCTTGAGAGTTTAATGGCTCAGGTTATTCACAAGCAGGAGCAGATGCATCAGCAATTCATGGACATGATTGAGCGCAAAGAAAGGGAACGCATCTCTAGAGAAATAGCTTGGAGGCAACAGGAGTTGGACCGAGCCAACAAGGAGGAGCAGCTTCGATCCCAAGAGGCTGCTCGTAGCCTTGCCCTTATTTCCCTCATCCACAAGACTCTTAACCATCCCCTGCCCCAGCGTCTGCAGGAGTTGGATCCCAAGTTTCCTTCTCTAGGCTCAATAACCCCCATGTGGCAACAAGTCTCGGCTTCAACTGCTAACATGGGATACATTCACGATGCTAAGATCTGTACAAATAAGTGTGACAATATCAACAATAAGGCATCAGGGAGTGGGAAGAAGCCTTCTCTTACTGCCAATTCATTTCATGAGCTTCAAACCCTCTTCAGAAATCAACTCATCCCCGCCACTAATGCTAATTCTCCCACTGATGAACATGCATTCTCCTATGGAAAGGAGATCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52787.p1 GENE.R_Transcript_52787~~R_Transcript_52787.p1 ORF type:complete len:329 (+),score=91.03 R_Transcript_52787:184-1170(+)
MEDVLSCVELEEELSPFPEPEAEASAGSGDGGGCGGVLSYPHPESAGLSCSIPAQKLRPIRSNANKSNPNPKAKAEEFNNEDEDELSAMQLVKIKSEMDAHFISTLKSQFSHLLDLPFSSSFSYSSDGSGESAAAPNQSEYRKRVKRNKRKKVELFLESLMAQVIHKQEQMHQQFMDMIERKERERISREIAWRQQELDRANKEEQLRSQEAARSLALISLIHKTLNHPLPQRLQELDPKFPSLGSITPMWQQVSASTANMGYIHDAKICTNKCDNINNKASGSGKKPSLTANSFHELQTLFRNQLIPATNANSPTDEHAFSYGKEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST