Transcript Information: R_Transcript_52858.p1


Annotated TAIR IDAT2G35330.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14869179-14871673 | Forward length=738
E-Value2.6E-279
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.190009872362
Replicate 216.254278825678
Replicate 317.608580601124
Condition 2: 8 Hour
Replicate 117.456589431777
Replicate 219.927044361873
Replicate 319.732159028149
Condition 3: 24 Hour
Replicate 118.241305334666
Replicate 217.584192802555
Replicate 317.718618079869


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52858.p1 GENE.R_Transcript_52858~~R_Transcript_52858.p1 ORF type:complete len:735 (+),score=201.41,zf-C3HC4_3|PF13920.2|3.4e-12,zf-C3HC4_2|PF13923.2|1.1e-05 R_Transcript_52858:422-2626(+)
ATGGGTTGTACTGTTAGAGAAAAACACATCAGAACCAATCGTAGAGCTCGATCGGTGAAACCCACAAACACTGATGTTTCTGATCATTATAATCATAGTCATAGTAATAACAACGATAGACCTTCATGTATTGCTAAATCTATGCTTGAATCTGGGTTTAAACCATGGACCTACAACATGGGTTTTAATGAAAATACTATAACAACATCAACAAACCCTAAGAATAATAATCCTAAGAACTCTCCCCATAACCCAGGTTTTGATGATTGTGGTTGGGGTTACTGTACTGAGGAACAGTTGGAGGAGATTTTGTTGAAGAACTTGGAGTTTTTGTATAATGAGGCGATTTCAAAGCTTGTTTCTTTGGGTTATGATGAGGAGGTTGCTTTGAAGGCTATTTTGAGGAATGGCCATTGTTATGGGGGTATGGATGTCTTGACCAATATCTTGCATAATACCTTGGCTTTTTTGAATAGTGGGTGTTGTGGGAATGATGGTGGGTCTGATGAATCAGAGCATGGTTTTCCGGATTTGAGGCAGTTGGAGATGTATTCGCTTGCGGGTATGGTTTGCTTGTTGCAGCAAGTTCGCCCGAATTTGAGCAGAGGTGATGCTATGTGGTGTCTTCTTATGAGTGATCTCCATGTGGGTAGGGCGAGCTCAATTGAAATTCCAATGATTCCTTCCCCAAGTAATAATGCAGTGAGTGGTGTAGATGGTGGTAACAACAACAATGTAGGTAGTTCTGGGATTAGTGTGCCCCATGGACTGTGTAAGTTCCATGGTGGTTGGGGTTTTGGAAATGGGGGTAATTCGGAGCTTCCTGTTAATGGGTTTGGGGGGTTCTTCTCGTATTCAGAAACAGGTTTTCAAAGGGAGATTGATTGTCCTAAGAGGTTTAATCTTAGTCCTTCTATGAAGTCTTTGTTGAAGAGGAATGTTGCAGCATTTGCTGCCGGGTTCCGTGCTAAACAGGCGCTGCAAATGCAGTCTCAACTGTGCAGCAGCTCTGCAGGGAGCGGAGATTGCTCAAAAGGAACACCACTGCCTGCTGTTGTGGCAGCTGATCCGTCTGAGGATGCTCGTGATAGTAACCAAGACGTGGTCAACTCAGTTTTGAGTAAGTTCCGGGAGTTGAATCTTGATGAGAATTTGAAGTCCGTCGCGGAGGATCGGAAGGATGAGGTAATACTAACTTTATTGCATCAAATAAAGGATCTAGAGAAGCAAGTGAAGGAGCGAAAAGAGTGGGCTCACCAGAAGGCACTGCAAGCTGCTAAAAAACTCAGCAATGACCTGACAGAACTCAAGGTATTAAGGATGGAGAGAGAGGAGACTCAGAGATTGAAAAAGGGTAAGCAGACCCTGGAAGATACAACCATGAAGAGGCTCTCAGAGATGGAGAATGCTCTCAGGAAGGCTAGTAGTCAAGTAGACCGTGCAAATGCAGCTGTAAGACAGCTTGAGATTGAGAATGCTGAAATTAGAGCTGAGATGGAAGCTTCTAAGTTGAGTGCATCAGAATCAGTGACAACCTGTTTAGAGATTGCAAAAAGGGAAAAGAAGTGTTTGAAGAGACTCCTAGCTTGGGAGAAGCAGAAAACAAAGTTGCAGGAGGAAATTGCTGCTGAGAAGCAGAAGATTGCTGACTTTCAACAGCAGTTGGTACAGATTCATGTAGCTCAAAAAGAAGCTGAGGCAAAATGGAGGCAGGAAGTGAAGGAGAAGGAGCGTGCGGTGTCTCAGGTGGAGGAGGAAAGGCGTTCCAAGGAAGCAACTGAGGGCAATAACAAGAGAAAGCTTGAAGCTCTTCGGTTGAGGATAGAGATAGACTTCCAGCGTCACAAGGATGATCTCCAGCGGCTCGAGCAGGAGCTGTCTCGCCTTAAAATGAGTGCAGAGTCCATTGAGCCACTGGACCTGCCTGATAAATTTGTTTCAGGAAGCCCTGAATCAGTTAAACATCAAGGTGAAACAATTGCCAGACTTCAGCGAGAACTGGAGGAACCTGAAAAGGAAGTTGGTTGTGATAGGGAGTGCTTGTTTTGTATGAAAGAAGAAGTTTCTGTTGTATTCTTGCCTTGTGGACACCAAATAATGTGTGCCAGCTGTGGTGAGGATTATGGGAAAAAAGGGAAGGCTAATTGCCCATGTTGTCGGGTCCCCATTGAACAGAGAGTCCGCGTTTTTGGTGCGAGCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52858.p1 GENE.R_Transcript_52858~~R_Transcript_52858.p1 ORF type:complete len:735 (+),score=201.41,zf-C3HC4_3|PF13920.2|3.4e-12,zf-C3HC4_2|PF13923.2|1.1e-05 R_Transcript_52858:422-2626(+)
MGCTVREKHIRTNRRARSVKPTNTDVSDHYNHSHSNNNDRPSCIAKSMLESGFKPWTYNMGFNENTITTSTNPKNNNPKNSPHNPGFDDCGWGYCTEEQLEEILLKNLEFLYNEAISKLVSLGYDEEVALKAILRNGHCYGGMDVLTNILHNTLAFLNSGCCGNDGGSDESEHGFPDLRQLEMYSLAGMVCLLQQVRPNLSRGDAMWCLLMSDLHVGRASSIEIPMIPSPSNNAVSGVDGGNNNNVGSSGISVPHGLCKFHGGWGFGNGGNSELPVNGFGGFFSYSETGFQREIDCPKRFNLSPSMKSLLKRNVAAFAAGFRAKQALQMQSQLCSSSAGSGDCSKGTPLPAVVAADPSEDARDSNQDVVNSVLSKFRELNLDENLKSVAEDRKDEVILTLLHQIKDLEKQVKERKEWAHQKALQAAKKLSNDLTELKVLRMEREETQRLKKGKQTLEDTTMKRLSEMENALRKASSQVDRANAAVRQLEIENAEIRAEMEASKLSASESVTTCLEIAKREKKCLKRLLAWEKQKTKLQEEIAAEKQKIADFQQQLVQIHVAQKEAEAKWRQEVKEKERAVSQVEEERRSKEATEGNNKRKLEALRLRIEIDFQRHKDDLQRLEQELSRLKMSAESIEPLDLPDKFVSGSPESVKHQGETIARLQRELEEPEKEVGCDRECLFCMKEEVSVVFLPCGHQIMCASCGEDYGKKGKANCPCCRVPIEQRVRVFGASS*

Click here to download the sequence:
Link to NCBI Protein BLAST