Transcript Information: R_Transcript_52874.p1


Annotated TAIR IDAT2G20760.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8943279-8945108 | Reverse length=338
E-Value1E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.158641959918
Replicate 29.1858814321304
Replicate 312.203291755093
Condition 2: 8 Hour
Replicate 16.3400900309831
Replicate 26.189172652471
Replicate 36.266627476086
Condition 3: 24 Hour
Replicate 19.7707334332193
Replicate 210.436863582148
Replicate 37.8821793664124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52874.p1 GENE.R_Transcript_52874~~R_Transcript_52874.p1 ORF type:complete len:336 (+),score=103.06,Clathrin_lg_ch|PF01086.13|7.4e-10,Clathrin_lg_ch|PF01086.13|6.9e+03 R_Transcript_52874:396-1403(+)
ATGTCGATGTTGGACGACGTGGTTGAGGGAGACCCACACCCAGGCTTTGGGGACGATGTGGAGTATTCAGGCTTTGACCCGAATTTCACAGATGATGATCCGAGTGGGGGTGGGTTCGAATCAGGAGAACAACAGGAGTATAGTCATGTATTTGAATCCGAGATGAATATGAATGGGGAACAACAAGAGCGTGAGGCGTTGGATGAAGGGATATTTGCTGCCGCTGACGGTGATGATGACGGGGCTGTCTTGCCTCCCCCTACGGCAATGCCTCATGAAGAAGGCAAAGCCTTCCGCGAGTGGCGTCGTCAAAATGCCATACATCTGGAAGAGAAGGAGAAGAGGGAGAAAGAAATGAGGAATCAGATAATCAATGAAGCTGAAGACTACAAACGGTCATTCTACGAGAAAAGAATGCGCAACTGTGAGACTACCAGGACACAAAATCGAGAGAGGGAGAAGTTGTACTTGACAAATCAAGACAAGTTTCACAAAGAGGCTCACAAACATTACTGGAAAGCAATTTCGGAGCTGATCCCACGTGAAGTGCCTAACTTAGAGAAGAAGAGAGGAAAGAAAGATGGGGATAAGAAGCCCTCTGTAGTGGTTATTCAGGGTCCTAAACCAGGAAAACCTACTGATCTCTCCCGCATGCGTCAAATTGTTCTAAAGCTGAAACAGAGGCCTCCACCCCATATGATGCCTCCATCTCCTAAAGAACCCCAGAAGGATGCTGCCAAAAACGACACCAAGAAAGACACAAAAGACGCCTCTAAAGAAGACACCAAAGATGGTGCTACAAAAGAAGATACTAAGAAAGATGTCACTCCGACATCTGACAATAACAGTCTTGAGAAGACTGATGATTCCGCTCCCAAGGATGTTGGGGTCTCCAAACCAGAGGCTCAGGCTCAGGCTCAGTCTCAGGAGACTGCAGTTCCTCCTTCGGGGGAGGGGGGTGAGCAGGCCAAAGAAGCTGAGCCTGCTCAGCCAGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52874.p1 GENE.R_Transcript_52874~~R_Transcript_52874.p1 ORF type:complete len:336 (+),score=103.06,Clathrin_lg_ch|PF01086.13|7.4e-10,Clathrin_lg_ch|PF01086.13|6.9e+03 R_Transcript_52874:396-1403(+)
MSMLDDVVEGDPHPGFGDDVEYSGFDPNFTDDDPSGGGFESGEQQEYSHVFESEMNMNGEQQEREALDEGIFAAADGDDDGAVLPPPTAMPHEEGKAFREWRRQNAIHLEEKEKREKEMRNQIINEAEDYKRSFYEKRMRNCETTRTQNREREKLYLTNQDKFHKEAHKHYWKAISELIPREVPNLEKKRGKKDGDKKPSVVVIQGPKPGKPTDLSRMRQIVLKLKQRPPPHMMPPSPKEPQKDAAKNDTKKDTKDASKEDTKDGATKEDTKKDVTPTSDNNSLEKTDDSAPKDVGVSKPEAQAQAQSQETAVPPSGEGGEQAKEAEPAQPVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST