Transcript Information: R_Transcript_52879.p1


Annotated TAIR IDAT2G20760.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8943279-8945108 | Reverse length=338
E-Value7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1085330973898
Replicate 25.4801664608577
Replicate 34.4660934935895
Condition 2: 8 Hour
Replicate 12.0789885332567
Replicate 21.6876137238631
Replicate 32.4544630713102
Condition 3: 24 Hour
Replicate 14.6204391904813
Replicate 24.1613696019957
Replicate 34.0609263412797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52879.p1 GENE.R_Transcript_52879~~R_Transcript_52879.p1 ORF type:5prime_partial len:318 (+),score=102.18,Clathrin_lg_ch|PF01086.13|6.2e-10,Clathrin_lg_ch|PF01086.13|8.2e+03 R_Transcript_52879:1-954(+)
GATGTGGAGTATTCAGGCTTTGACCCGAATTTCACAGATGATGATCCGAGTGGGGGTGGGTTCGAATCAGGAGAACAACAGGAGTATAGTCATGTATTTGAATCCGAGATGAATATGAATGGGGAACAACAAGAGCGTGAGGCGTTGGATGAAGGGATATTTGCTGCCGCTGACGGTGATGATGACGGGGCTGTCTTGCCTCCCCCTACGGCAATGCCTCATGAAGAAGGCAAAGCCTTCCGCGAGTGGCGTCGTCAAAATGCCATACATCTGGAAGAGAAGGAGAAGAGGGAGAAAGAAATGAGGAATCAGATAATCAATGAAGCTGAAGACTACAAACGGTCATTCTACGAGAAAAGAATGCGCAACTGTGAGACTACCAGGACACAAAATCGAGAGAGGGAGAAGTTGTACTTGACAAATCAAGACAAGTTTCACAAAGAGGCTCACAAACATTACTGGAAAGCAATTTCGGAGCTGATCCCACGTGAAGTGCCTAACTTAGAGAAGAAGAGAGGAAAGAAAGATGGGGATAAGAAGCCCTCTGTAGTGGTTATTCAGGGTCCTAAACCAGGAAAACCTACTGATCTCTCCCGCATGCGTCAAATTGTTCTGAAGCTGAAACAGAAGCCTCCATCCCATATGATGCCTCCATCTCCTAAAGAACCCCAGAAGGATGCCGCCAAAAACGACACCAAGAAAAACACAAAAGACGCCTCTATACAGGACGCCAAAGATGGTACTGCAAAAGATGATACTAAGAAAGATGTCACTCCAACATCTGACGATAAAAGTCTTGAGAAGACTGATGATTCCGCTCCCAAGGATGCTGCTGCTGATGGTTGGGACTCCAAACCAGAGGCTCAGTCTCAGGAGGCTGCTGTTCCTCCTTCGGGGGAGGGGGGTGAGCAGGCCAAAGAAGCTGAGCCTGCTCAGCCAGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52879.p1 GENE.R_Transcript_52879~~R_Transcript_52879.p1 ORF type:5prime_partial len:318 (+),score=102.18,Clathrin_lg_ch|PF01086.13|6.2e-10,Clathrin_lg_ch|PF01086.13|8.2e+03 R_Transcript_52879:1-954(+)
DVEYSGFDPNFTDDDPSGGGFESGEQQEYSHVFESEMNMNGEQQEREALDEGIFAAADGDDDGAVLPPPTAMPHEEGKAFREWRRQNAIHLEEKEKREKEMRNQIINEAEDYKRSFYEKRMRNCETTRTQNREREKLYLTNQDKFHKEAHKHYWKAISELIPREVPNLEKKRGKKDGDKKPSVVVIQGPKPGKPTDLSRMRQIVLKLKQKPPSHMMPPSPKEPQKDAAKNDTKKNTKDASIQDAKDGTAKDDTKKDVTPTSDDKSLEKTDDSAPKDAAADGWDSKPEAQSQEAAVPPSGEGGEQAKEAEPAQPVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST