Transcript Information: R_Transcript_52903.p1


Annotated TAIR IDAT3G01280.1
Annotated Gene Namevoltage dependent anion channel 1
Annotated Gene Symbol(s)VDAC1, ATVDAC1
Annotation TypeOrtholog
Chromosome Positionchr3:85754-87612 | Forward length=276
E-Value1.8E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1241.90115402445
Replicate 2247.71086556124
Replicate 3264.37848409711
Condition 2: 8 Hour
Replicate 1202.51666640483
Replicate 2221.34851266618
Replicate 3233.41529613653
Condition 3: 24 Hour
Replicate 1259.00053280352
Replicate 2260.52276927787
Replicate 3236.41881741226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52903.p1 GENE.R_Transcript_52903~~R_Transcript_52903.p1 ORF type:complete len:277 (+),score=60.52,Porin_3|PF01459.18|3.3e-75 R_Transcript_52903:258-1088(+)
ATGGTGAAGGGTCCTGGGCTTTACTCTGATATCGGCAAAAGGGCAAGAGATCTTCTTTACAGGGATTATCAAAGTGACCACAAATTTACTCTCACTACTTTCACCTCTACTGGAGTTGCTATCACTTCTACTGGGACAAAGAAGGGAGAATTGTTTTTGGCAGATGTTAACACTAAATTGACGAACAAGAACATTACCACAGATGTGAAAGTTGATACCAACTCGAATCTCTACACAACAATTACAGTTGATGAACCTGCTCCTGGTCTGAAGGCTATTTTCAGCTTTATTGTCCCTGACCAGAGATCTGGCAAGGTTGAACTCCAGTACTTGCATGAGTATGCTGGCATTAGCACTAGCATTGGTTTGACAGCAAACCCTGTTGTGAACTTCTCGGGTGTGATTGGAAACAACACTCTTGCTTTGGGCACTGATGTTTCATTTGACACTGCTTCTGGGAACTTCACCAAGTGCAATGCTGGACTCAGCTTTACCAATTCTGATCTCATTGCATCTCTGAATGTGAATGACAAAGGGGACACCTTGAATGCTTCATACTACCACATCGTGAGCCCACTGAGCAACACAGCTGTCGGTGCTGAGCTGAACCACAGCTTTTCAAGTAACGAGAATACCCTCACCATTGGTACTCAGCATGCTTTGGATCCACTAACTTTGGTTAAGGCTCGGGTTAACAACTATGGGAAAGCAAGTGCGCTCATCCAGCATGAATGGCGCCCAAGATCACTAGTCACTATCTCTGGAGAGGTGGACACTCGTGCCATCGAAAAGAGTGCTAAGCTCGGTTTGGCTCTGGCTTTGAAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52903.p1 GENE.R_Transcript_52903~~R_Transcript_52903.p1 ORF type:complete len:277 (+),score=60.52,Porin_3|PF01459.18|3.3e-75 R_Transcript_52903:258-1088(+)
MVKGPGLYSDIGKRARDLLYRDYQSDHKFTLTTFTSTGVAITSTGTKKGELFLADVNTKLTNKNITTDVKVDTNSNLYTTITVDEPAPGLKAIFSFIVPDQRSGKVELQYLHEYAGISTSIGLTANPVVNFSGVIGNNTLALGTDVSFDTASGNFTKCNAGLSFTNSDLIASLNVNDKGDTLNASYYHIVSPLSNTAVGAELNHSFSSNENTLTIGTQHALDPLTLVKARVNNYGKASALIQHEWRPRSLVTISGEVDTRAIEKSAKLGLALALKP*

Click here to download the sequence:
Link to NCBI Protein BLAST