Transcript Information: R_Transcript_52935.p1


Annotated TAIR IDAT3G57230.1
Annotated Gene NameAGAMOUS-like 16
Annotated Gene Symbol(s)AGL16
Annotation TypeHomolog
Chromosome Positionchr3:21177710-21180671 | Forward length=240
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40743216416783
Replicate 20
Replicate 30.20452444282279
Condition 2: 8 Hour
Replicate 10
Replicate 21.4973804804365
Replicate 30.89137373582257
Condition 3: 24 Hour
Replicate 10.51245105418982
Replicate 20.29538293157023
Replicate 30.58627780411332


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52935.p1 GENE.R_Transcript_52935~~R_Transcript_52935.p1 ORF type:complete len:224 (+),score=38.25,SRF-TF|PF00319.14|5.3e-25,K-box|PF01486.13|2e-23,K-box|PF01486.13|44 R_Transcript_52935:376-1047(+)
ATGGGAAGAGGAAAGATATCAATAGAGAGAATTGATAACTTGACAAGCAGGCAAGTGACCTTCACAAAGAGAAGAAAGGGGCTGTTTAAGAAGGCAAGAGAGCTTTCTATTCTTTGTGATGCTCAAGTTGGAATCATCATCTTTTCCAGCACTGGCAAGGTCTATGAATTTTCTAGTCACTGCATGCAAACACTGCTGGAGAGATACTACAAAGCTAATGAAGATAATCAAGTTCTCAATCCCACTTCTGAAGCACAGTTATGGAAGGTGGAAGCAGAAAGCTTAAGGCAACAACTACAGGAACTGAGGAAGAGCCACAGGCAATTGTTGGGAGAAGACCTTTCGGAATTAGGCATGGATCACTTGGAGACCCTTGAGGACCAGCTCGAGATGGGTTGGAAGTCCATTCGCACTAGAAAGGAAGAGCTATTCAGAGACAAAATACAGGAACTTAATAAACAGGAGATACTCATGCACCAAGAGAACATGGAACTGCATAAGAAGATCAATCTTATGCGCCAAGAAATTGCTGAACTGCAGAAGAAGGTTAATAATAGAACACGCTACATCACTCTACTTCCTATGCATATTGATTGCCATACTGTTACGAGTCACGCGAAATGCGTAACAGTCATGCACATAACCCCTATGAAAAAACCGCAATATCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52935.p1 GENE.R_Transcript_52935~~R_Transcript_52935.p1 ORF type:complete len:224 (+),score=38.25,SRF-TF|PF00319.14|5.3e-25,K-box|PF01486.13|2e-23,K-box|PF01486.13|44 R_Transcript_52935:376-1047(+)
MGRGKISIERIDNLTSRQVTFTKRRKGLFKKARELSILCDAQVGIIIFSSTGKVYEFSSHCMQTLLERYYKANEDNQVLNPTSEAQLWKVEAESLRQQLQELRKSHRQLLGEDLSELGMDHLETLEDQLEMGWKSIRTRKEELFRDKIQELNKQEILMHQENMELHKKINLMRQEIAELQKKVNNRTRYITLLPMHIDCHTVTSHAKCVTVMHITPMKKPQYP*

Click here to download the sequence:
Link to NCBI Protein BLAST