Transcript Information: R_Transcript_52965.p1


Annotated TAIR IDAT3G55760.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20700648-20702886 | Forward length=578
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77261210390344
Replicate 20.66654921956502
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 31.1524832139928
Condition 3: 24 Hour
Replicate 10.36440963853499
Replicate 20.46677796593814
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52965.p1 GENE.R_Transcript_52965~~R_Transcript_52965.p1 ORF type:complete len:189 (+),score=48.70 R_Transcript_52965:452-1018(+)
ATGGCGTCCCACGTAGCGCACCACCACGCCATTGTTAGACCTTCAAGACCAACTACTCACCCGCTTCTCCATTCCAATAATAAACCTAAACTCGTCACCATTTCAACAGAAACAGCCAGAAGAAGAGCAAGAAAGCATGCTGATCACCGAATTAGGGCTTGGAATGGTGATGAGTCGTACCTGGGGATGTGGAAGAGAGCTGTTGACAGAGAGAAGAGAGAGTCTGAGTTCCTCAAAATTGCCGAGAACTCCGATGGTGGTGCGGGTTCTGATGCTGAACCTGAGAAGGAGAGCCCTGAGGTTTTGGAAAGGAGGAGTCAGGAGTTCCAGAAGATTCTGGGAGTTTCTAGAGAGGAGAGAGATAAGATTCAGAGAATGCAGGTCATTGATCGCGCTGCTGCCGCCATTGCTGCTGCTCGCGCTCTCCTGAAAGAGATTCCTCCTCCTCCAGCTCCGTCTCACACTCAGAAGCTGAGGGCCGCAAATGTTGGCCCTCAATCTAGTGGCGGAGGTAAATTTCATTTTTTGGGGGTGCAAATTCAGTTCAGTTGCAGTTCGATGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52965.p1 GENE.R_Transcript_52965~~R_Transcript_52965.p1 ORF type:complete len:189 (+),score=48.70 R_Transcript_52965:452-1018(+)
MASHVAHHHAIVRPSRPTTHPLLHSNNKPKLVTISTETARRRARKHADHRIRAWNGDESYLGMWKRAVDREKRESEFLKIAENSDGGAGSDAEPEKESPEVLERRSQEFQKILGVSREERDKIQRMQVIDRAAAAIAAARALLKEIPPPPAPSHTQKLRAANVGPQSSGGGKFHFLGVQIQFSCSSME*

Click here to download the sequence:
Link to NCBI Protein BLAST