Transcript Information: R_Transcript_52966.p6


Annotated TAIR IDAT3G55760.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20700648-20702886 | Forward length=578
E-Value7.1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9322123102836
Replicate 23.9368063280559
Replicate 34.0086790793267
Condition 2: 8 Hour
Replicate 19.1821993552169
Replicate 210.341907851548
Replicate 38.6220150446838
Condition 3: 24 Hour
Replicate 17.7482599393501
Replicate 27.1679591394376
Replicate 37.6606966404141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52966.p6 GENE.R_Transcript_52966~~R_Transcript_52966.p6 ORF type:complete len:80 (+),score=12.51 R_Transcript_52966:2509-2748(+)
ATGAAGCAGGGAGAGACCTGGTGGGAAGGCAAATATGGAGAACGATGGAACCGTACATGGGGTGAACAGCATAATGGCTCTGGGTGGGTGCACAAGTATGGCAAAAGCAGCAGCGGCGAGCACTGGGATACTCATGTGCAAGAAGATACCTGGTATGAGAGATATCCTCATTACGGCTTTATGCATTGCTTCCAAAACTCGGTCCAGCTAAGGGAAGTTAAGAAACCATTCGAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52966.p6 GENE.R_Transcript_52966~~R_Transcript_52966.p6 ORF type:complete len:80 (+),score=12.51 R_Transcript_52966:2509-2748(+)
MKQGETWWEGKYGERWNRTWGEQHNGSGWVHKYGKSSSGEHWDTHVQEDTWYERYPHYGFMHCFQNSVQLREVKKPFEE*

Click here to download the sequence:
Link to NCBI Protein BLAST