Transcript Information: R_Transcript_52972.p1


Annotated TAIR IDAT1G29690.1
Annotated Gene NameMAC/Perforin domain-containing protein
Annotated Gene Symbol(s)CAD1
Annotation TypeOrtholog
Chromosome Positionchr1:10379310-10381861 | Reverse length=561
E-Value4.5E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.440978107769
Replicate 215.136031635722
Replicate 318.905903289975
Condition 2: 8 Hour
Replicate 114.003902212979
Replicate 218.072493542876
Replicate 322.22329039996
Condition 3: 24 Hour
Replicate 120.638439716686
Replicate 221.639834493666
Replicate 320.950731027355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52972.p1 GENE.R_Transcript_52972~~R_Transcript_52972.p1 ORF type:complete len:584 (+),score=98.19,MACPF|PF01823.15|7.6e-28 R_Transcript_52972:639-2390(+)
ATGGATGAAAAAGCAGCAGCTTTGCATACAGCTATAAATGCAGTACAAGCATTAGGGAGGGGTTTTGATGTCAACTTTGATACAAGGTTGTTGTACTGCAAAGGGGTTGCTGGTTCTAGAATTGTCCAGGTTGATGAACAAGTCAATTGCGATTTGTGTTTATACCCTAAATTGGTTGTCCCCAATGTTCCTAGGGATATCAAGAATACTAGTGGAAACCCTCATAGAGAATCTTCTGGCATCTGCACTTATGATGAGATGGTGGAGTACTTCAACAAAAAGGCAAGTCTATCAGGCAATGTTCCTCTTGGGAGCTTCAACTCTGCTTTTAGTTTTACTGGTTCAAAGCATATTGATGCCGCAACCACTAAGACCTTATCAGTAGATGGTTTTGTGATACCACTTGCCAAGGTTCAGCTTGGCAAATCTCCATTAGTCTTACAAGAGAATGTAATAAGGGCCATCCCTATTTCGTGGGACCCTCCTTCATTAGCCAGTTTCATTGAAAACTTTGGAACACACATTATTACATCTGTCACGATTGGCGGTAAGGATGTGATTTACGTTAGACAGCATCAATCATCATCTTTATCTTCCACAGAGATGAAAAGCTACGTACAAGATATTGGAAATCAGAGGTTTATGGATACAGAAAGTCATGCCAGTTCAGGTCCAATTAAAATAATGGACAAGGTTGGCGATTCTGGGTTATTCCACGGCCAAGGAGTATACCCTCAACCAGCAGTCATGTCATCCCTCAACGGGAAAGAAGAGATTACTGTCATTTTCAGGCGGAGGGGGGGAGATGATCTGGAGCAAAGTCACACACAATGGGCTAGGACTGTGGAGTCTTCTCCAGACATCATTGAAATGACCTTTGTCCCCATTACTGATCTGATTGAAGATTTAGTGAGAAGAGAACATCTAGCCCGAGCAATTCGTCTCTATCTTGAATACAAGCCTCAGATTGAGGAGCTTAGATATTTTCTGGAGTTTCAAATACCTCGGGTATGGGCTCCTGTGCATGATAGGCATCCTGGTCACCAGAGAAAGGAACCTGTGTGTCCATCTTTGCAATTCAGTTTGATGGGGCAAAAGCTTTATGTCAGCCAAGAGCAGGTATCTGTTGGCCGCAAACCTGTAACAGGACTCAGATTATGTTTAGAAGGACTGAAGCAGAATAGACTGAGCATACATCTTCAACACTTGGCATCCTTGCCAAAAATCGTTCTTCCATATTGGGACACCCATGTAGCAATTGGTGCGCCCAAGTGGCAGGGACCTGAGGAACAAGATAGTCGATGGTTCGAACCAGTGAAATGGAAAAATTTCTCGCATGTCAGCACTGCCCCCATCGAGAGCCCTGAAACTTTTGCAGGTGAGGTTGCTGGTGTGTACATAGTCACGGGCGCTCAGCTTGGAGTATGGGATTTCGGGTCAAGAAACGTTTTGTACATGAAGCTCCTATACTCTAGGCTTCCAGGATGCACGATTAGAAGGTCGCTATGGGATCATTCACCAAGTGGGGATCCCAAGAAGGCGACTGCTCCAGGAACTAGCAGTTCTGGTGACTCGAGCTCTGGTTCAACAGAAAGCCTTAGTGGCAACAAATTGTTCAAGTTTGTGGATCTGTCGGAAATGACTAAAGGCCCAGAAGATCCTCCGGGTCATTGGTTGGTTACAGGCGGAAAACTCGGAGTGGAGAAAGGGAAAATTGTGTTGAGAGTGAAGTATTCATTGTTGAACTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52972.p1 GENE.R_Transcript_52972~~R_Transcript_52972.p1 ORF type:complete len:584 (+),score=98.19,MACPF|PF01823.15|7.6e-28 R_Transcript_52972:639-2390(+)
MDEKAAALHTAINAVQALGRGFDVNFDTRLLYCKGVAGSRIVQVDEQVNCDLCLYPKLVVPNVPRDIKNTSGNPHRESSGICTYDEMVEYFNKKASLSGNVPLGSFNSAFSFTGSKHIDAATTKTLSVDGFVIPLAKVQLGKSPLVLQENVIRAIPISWDPPSLASFIENFGTHIITSVTIGGKDVIYVRQHQSSSLSSTEMKSYVQDIGNQRFMDTESHASSGPIKIMDKVGDSGLFHGQGVYPQPAVMSSLNGKEEITVIFRRRGGDDLEQSHTQWARTVESSPDIIEMTFVPITDLIEDLVRREHLARAIRLYLEYKPQIEELRYFLEFQIPRVWAPVHDRHPGHQRKEPVCPSLQFSLMGQKLYVSQEQVSVGRKPVTGLRLCLEGLKQNRLSIHLQHLASLPKIVLPYWDTHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIESPETFAGEVAGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHSPSGDPKKATAPGTSSSGDSSSGSTESLSGNKLFKFVDLSEMTKGPEDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY*

Click here to download the sequence:
Link to NCBI Protein BLAST