Transcript Information: R_Transcript_52974.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value3.9E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1129.99584954227
Replicate 269.907682147979
Replicate 387.874608606954
Condition 2: 8 Hour
Replicate 155.081536195613
Replicate 277.901053119102
Replicate 3112.74743282492
Condition 3: 24 Hour
Replicate 169.922921442093
Replicate 255.999352573599
Replicate 374.835104596154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52974.p1 GENE.R_Transcript_52974~~R_Transcript_52974.p1 ORF type:complete len:525 (+),score=38.70,AMP-binding|PF00501.24|6e-97,AMP-binding_C|PF13193.2|1.3e+04,AMP-binding_C|PF13193.2|1.1e-15 R_Transcript_52974:98-1672(+)
ATGGAGAGCCTGACTCTCACCGGACTGTTGAAAGACGTCGCCGGAAAGTTCCCCGACCGGCGAGCAATATCGGTTTCCGGGAAGTTCGACCTTAGCCATTCTCGTTTACACCATTTGGTCGAACGTGCCGCTTCTCGTCTTGCTGCTTCCGGTGTTTGTCCTGGCGATGTTGTTGCCCTCACCTTCCCTAACAACATCGAGTTTGTGATAGCGTTCTTGGCGGTGATACGAGCAAGAGCAACAGCGGCTCCACTGAACCCGGCTTACACAGCCGAGGAGTTCGAGTTTTACTTGTCAGACTCAGAATCCAAGCTCCTTCTAACTTCCTTAGAAGGCAACAAGGAAGCCGAAGCCGCGGCTTCCGAGCTCAACATCCCCCACGCCACGGCTTCACTTCCCGACTCTGACTCGGACCTCACTCTCTCCCTGACTCAGCCCGAGTCCGACTCGGACAACTCGGTGGCCGAACTCACCAACGACCCGTCCGACGTGGCCCTGTTCCTCCACACCTCGGGGACCACCAGCCGCCCCAAGGGGGTCCCACTGAGTCAACTCAACCTGGTCTCCTCGGTCCGGAACATCAAATCGGTGTACCGAATCACCGAGTCGGACTCGACAGTCATAGTCCTCCCGCTCTTCCATGTGCACGGGTTGATGGCCGCGTTGCTGAGTTCACTCGGAGCCGGCGCCGCCGTGACCCTCCCCGCTGCGGGGCGGTTTTCGGCGTCGTCGTTTTGGACCGACATGAACAAGTACAACGCCACGTGGTACACCGCGGTCCCCACCATCCACCAGATCATCCTCGACCGGCACCTCAACAAACCCGAACCGAATTACCCGAACCTGCGGTTCATCCGGAGCTGCAGCGCGTCGCTGGCTCCGGCTATCTTGGAGCGCCTCGAAGAGTCCTTTGGGGCGCCCGTCCTGGAGGCCTATGCTATGACGGAGGCCTCCCATTTAATGTGCTCGAACCCCTTACCCCAAGAAGGGCCCCACAAGGCAGGCTCAGTTGGGAGGCCTGTGGGGCAAAAGATGGCGGTTTTGGATGAGAATGGGGTTGCCCAAGGACCTGGGTCCAAAGGAGAAGTGTGCATTTGGGGTCCAAATGTAACAAAAGGATACAAAAATAACCCGGAAGCTAATAAGGCTGCTTTTCAATTCGGGTGGTTCCATACCGGTGATGTTGGTTATTTTGATGAGGAGGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGGGAAAAGATTTCTCCAATTGAAGTGGATGCAGTGCTTTTGTCGCATCCGGAAATCGCTCAAGCCGTTGCTTTCGGAGTTCCGGATGACAAGTATGGTGAAGAGATAAATTGTGCCGTAATTCCCAGAGAAGGGGCAAAACTTGACGAGGCAACGGTGACAAGCTTCTGCAAGAAAAACCTAGCATCATTCAAGGTTCCTAAGAAGGTTTTCATGACTGATTTTCTACCAAAAACCGCGACTGGGAAGATTCAGAGAAGAATCGTGGCAGAACACTTCCTTGCACAGATCTCAACTGCCAAAGTTCCCAAGTTTGGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52974.p1 GENE.R_Transcript_52974~~R_Transcript_52974.p1 ORF type:complete len:525 (+),score=38.70,AMP-binding|PF00501.24|6e-97,AMP-binding_C|PF13193.2|1.3e+04,AMP-binding_C|PF13193.2|1.1e-15 R_Transcript_52974:98-1672(+)
MESLTLTGLLKDVAGKFPDRRAISVSGKFDLSHSRLHHLVERAASRLAASGVCPGDVVALTFPNNIEFVIAFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSLEGNKEAEAAASELNIPHATASLPDSDSDLTLSLTQPESDSDNSVAELTNDPSDVALFLHTSGTTSRPKGVPLSQLNLVSSVRNIKSVYRITESDSTVIVLPLFHVHGLMAALLSSLGAGAAVTLPAAGRFSASSFWTDMNKYNATWYTAVPTIHQIILDRHLNKPEPNYPNLRFIRSCSASLAPAILERLEESFGAPVLEAYAMTEASHLMCSNPLPQEGPHKAGSVGRPVGQKMAVLDENGVAQGPGSKGEVCIWGPNVTKGYKNNPEANKAAFQFGWFHTGDVGYFDEEGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDDKYGEEINCAVIPREGAKLDEATVTSFCKKNLASFKVPKKVFMTDFLPKTATGKIQRRIVAEHFLAQISTAKVPKFGA*

Click here to download the sequence:
Link to NCBI Protein BLAST