Transcript Information: R_Transcript_5298.p1


Annotated TAIR IDAT2G46550.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19112264-19113457 | Reverse length=397
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.868175224947
Replicate 28.9755177352114
Replicate 37.6938660628298
Condition 2: 8 Hour
Replicate 15.9812799871133
Replicate 27.8519127075919
Replicate 38.036590961698
Condition 3: 24 Hour
Replicate 110.339775774309
Replicate 211.953613597183
Replicate 37.518677182522


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5298.p1 GENE.R_Transcript_5298~~R_Transcript_5298.p1 ORF type:3prime_partial len:131 (-),score=35.42 R_Transcript_5298:2-391(-)
ATGGCTGGAACTGGAAGAGGTACCATGAAGAGCCAACAGATTACCAACAAACTAAAGGGCTTTGATGAGGACGATTTGATGATGGGGGTTATGTTGTCTCAGAAGCCCGGAATTGATCTCATACAGAACTGTGACTTGCCACCTCCTATGAAGGTCTTTTCTGGGTCTGACAATAAAACCGTCATCAGTTGTATGAACAGCAGGAAAACATGCAGTTTCAACAATCATGAGGATATTGAAGATGAAGGGGATGGAAAATTGGGGCTGTTGAGGGCACTGAGGTTGTCTCAGACTCGAGCCCGAGAGGCAGAAGCCAAGTTTGCAGATGTTTCTAAGGAGAGAGAGTTTGCTCGTCGTGCCTTACATGGAGCACTCGATGCAGCTTTTCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5298.p1 GENE.R_Transcript_5298~~R_Transcript_5298.p1 ORF type:3prime_partial len:131 (-),score=35.42 R_Transcript_5298:2-391(-)
MAGTGRGTMKSQQITNKLKGFDEDDLMMGVMLSQKPGIDLIQNCDLPPPMKVFSGSDNKTVISCMNSRKTCSFNNHEDIEDEGDGKLGLLRALRLSQTRAREAEAKFADVSKEREFARRALHGALDAAFR

Click here to download the sequence:
Link to NCBI Protein BLAST