Transcript Information: R_Transcript_52993.p1


Annotated TAIR IDAT3G12640.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4014455-4017675 | Forward length=638
E-Value4.4E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.158591999608
Replicate 29.1460006154931
Replicate 313.691002354864
Condition 2: 8 Hour
Replicate 110.453444514381
Replicate 210.61413783489
Replicate 314.500273607024
Condition 3: 24 Hour
Replicate 115.515623698029
Replicate 211.330849357677
Replicate 317.073043163875


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52993.p1 GENE.R_Transcript_52993~~R_Transcript_52993.p1 ORF type:complete len:691 (+),score=161.75,RRM_1|PF00076.18|1.5e-16,RRM_6|PF14259.2|5.2e+03,RRM_6|PF14259.2|2.3e-08,RRM_5|PF13893.2|5.8e-06,PWI|PF01480.13|1e-05 R_Transcript_52993:508-2580(+)
ATGGATGGCACATTTAGGATAAATTTCAGCGTAGATGGGACCGCTAAACTCGCAGAACGCTTGACGGATGTTCTCAAGGATTACATGGGGGAATTCGTTGACGACACTTTTGTGAAATATGTCATAGTTTTACTGGGCAATGGCAGGAGCAAGGAAGAAGTTAGGGAGGACCTTGATGTTTTTCTTGGAGACAAGACGGATTCTTTCGTTACATGGCTATGGGACCATCTTGCCTCAAATTTAGACCAGTATGTACAATCTCAGGCGTCGCACGTGGAGGATGAAGTGGCGAAAGCTAAATCCAAGCTGGTTGAGCAGGCTGATAAAGTTGATTCTGATTGTCCAGTTACAGACCCTGAAAGAGTTCAGTCTAACAGGTCTTCTAGAAGCAGGCACAATAGGGAATGGAAAGGACTTGTGACAGACGACACTCAACCTCCTCCACTTCGCAGTTCTGTTGCTGATCATATTCAGGATGAACCAAAAGCTCATCGTAGTGCTCTGCGCACCAAGCGATCTGTTTCTCCTGAGCCTCCTGTTCGTAGGAAAAGAGCTCGTCCTGATGAACCTCCCCGGCCAAAGAGAGAGGTATCTCAGGCAACCATCAATGCTCCCCGTAGGCTGCTGCAATTTGCTGTGAGAGAGGCAGTTGCAACTTCAAGATCCTCGAACTCGGTTGTAGAGCCTGTCCAGAAGCGACTTCGCTCTGTGGTTTCTACAACTACTGGTAATCCTACAGAAGAAGTTCATCCTCGGAAAGTACAGTCAGTGGCCAGGTTGCCAAACACTATGGCGACAGCTATCAAAGCTGTGGCAGAGGCTGCTGAAGATGTGAGAAAGGGGAGGACCGGAAATGTCTTTGATCGGTTGAGTCGTGGTGCTGATATCGTAGAAAGCAGTGAGCAAGTTTTACCACTTGAAGAATCTGCAATCCAAGATGATGAATATGAATATTATAGTCAAAATCATGCTCATCAGAGATATTTGCGCAAACCACACGACAGTGGACGGTTTAATAATGCATTTATGATGGATAGCAGCACAGGCCTGGCTTCTGATTCTGCATCTGATAATGAGGGATATGAAGATGTTAATGTTACGGGCCACAGGGTAAAGTGTGTATCTGAGACAGGTACTTCTGGTGCAAACAAAGTTGATGATTCATTGATGGTGCAGTATAGTGTTGCCCAGAATACAGATATGATTCGTCCATCTCAGAGGAGAGATCTGGAACCACCAGTTTCGGCAGCAAACGCTAAGCATAAGATTGTGAATATCTCAGTGAATGTAAATACATGGAAACCACCTCATTATCAACCACCCAGAGAAAATGTGGAAGCTGATACTCAAAAGACTCTGCAGGAGACTGATATTGGAGCTGGCAATTCTAATGTACGAGTCATGAAGGAAAATAGCAACCCACTTACTCTTATGGCCAATGGAAAACCTCCTGCAGACACCCAGAATGAAAGCCTGAAAACTGTGATGTCCATGGGTTCTGGGCAACTTTCTACTGGCCGTCCTCTGGAAGATGCTGATTCACGAACAATTTTTGTCAATAATGTTCATTTTGCTGCTACCAAGGATACTCTGTCTCGGCATTTCAACAAATTTGGAGAAGTGCTGAAAGTGATAATTTTAACTGATGCGGCTACAGGTCATCCAAAAGGGTCAGCGTATGTGGAATTTATGCGGAAGGAAGCAGCGGAAAATGCGTTGTCCTTGGATGGGACATCCTTCATGTCACGCATTATCAAGGTTGTGAAGAAAAGCTCTGCCCAACAGGAAGCCAGTCCTACGTTGACATGGCCCCGTATTACCCGGGGTTCTCCCTTTTCTGTTCCTAGATTTGCCCAGTCTCCTTTTCCGAGAGTCTTTCCTGGTGCTTTTAGAGCACGCCCGCCTCTTAAATCTGGTGCAAGGAGTATGCAGTGGAAGCGGGATGCACAGCAGACAACTTCTGACAGTGTCGTCTCAGTTTCTGGAAACACTGCGAATGCTGCACCAGCTGGTCGTGGTCTCACGTATGTTCGTCAAGAGTCCAAGACAGACGGAAATGCTGGTGGTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52993.p1 GENE.R_Transcript_52993~~R_Transcript_52993.p1 ORF type:complete len:691 (+),score=161.75,RRM_1|PF00076.18|1.5e-16,RRM_6|PF14259.2|5.2e+03,RRM_6|PF14259.2|2.3e-08,RRM_5|PF13893.2|5.8e-06,PWI|PF01480.13|1e-05 R_Transcript_52993:508-2580(+)
MDGTFRINFSVDGTAKLAERLTDVLKDYMGEFVDDTFVKYVIVLLGNGRSKEEVREDLDVFLGDKTDSFVTWLWDHLASNLDQYVQSQASHVEDEVAKAKSKLVEQADKVDSDCPVTDPERVQSNRSSRSRHNREWKGLVTDDTQPPPLRSSVADHIQDEPKAHRSALRTKRSVSPEPPVRRKRARPDEPPRPKREVSQATINAPRRLLQFAVREAVATSRSSNSVVEPVQKRLRSVVSTTTGNPTEEVHPRKVQSVARLPNTMATAIKAVAEAAEDVRKGRTGNVFDRLSRGADIVESSEQVLPLEESAIQDDEYEYYSQNHAHQRYLRKPHDSGRFNNAFMMDSSTGLASDSASDNEGYEDVNVTGHRVKCVSETGTSGANKVDDSLMVQYSVAQNTDMIRPSQRRDLEPPVSAANAKHKIVNISVNVNTWKPPHYQPPRENVEADTQKTLQETDIGAGNSNVRVMKENSNPLTLMANGKPPADTQNESLKTVMSMGSGQLSTGRPLEDADSRTIFVNNVHFAATKDTLSRHFNKFGEVLKVIILTDAATGHPKGSAYVEFMRKEAAENALSLDGTSFMSRIIKVVKKSSAQQEASPTLTWPRITRGSPFSVPRFAQSPFPRVFPGAFRARPPLKSGARSMQWKRDAQQTTSDSVVSVSGNTANAAPAGRGLTYVRQESKTDGNAGGA*

Click here to download the sequence:
Link to NCBI Protein BLAST