Transcript Information: R_Transcript_53019.p1


Annotated TAIR IDAT5G07120.1
Annotated Gene Namesorting nexin 2B
Annotated Gene Symbol(s)SNX2b
Annotation TypeOrtholog
Chromosome Positionchr5:2207065-2209355 | Reverse length=572
E-Value1.8E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.945086409239
Replicate 218.58209165763
Replicate 321.749428553838
Condition 2: 8 Hour
Replicate 118.940285778009
Replicate 221.542800798215
Replicate 325.804380254766
Condition 3: 24 Hour
Replicate 123.437761385775
Replicate 219.941950111863
Replicate 322.040232245691


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53019.p1 GENE.R_Transcript_53019~~R_Transcript_53019.p1 ORF type:complete len:574 (+),score=139.17,PX|PF00787.20|3.5e-21,Vps5|PF09325.6|2.4e-17 R_Transcript_53019:566-2287(+)
ATGATGGGCTCTGAGAGCCAAGGCTCAGAAGAGCCGGCCCATAATCACCCACTAGCTCAAACCGAAGAAGATATGGAAACCCTAGTTCTTGATGACCCATTGTCATCTTCCAAATCATCGCTTGCTATCTATAAAAGTGCGATTTCGACTTTATCTGAATCAAATCAGCATCAACATCATCCTTTATCACCCTCGGTTGTCGCTCAACCTGCTGATTCAGATCCCTTGTTGTCTTATGTGTCTGAGAGGGATCAATTTAGCCCTAAAGGTCATGATAATTCACATTTTGAGGACTCTGATTACTCTGACTTGCTTATTAGCCCTAATGGTGAGGTTAATGGTGGGGATTCCAATGGTTTCAACAGCCCTAGCTCGAATTCAGTGACGTCAGATAATGCACTAGGATCTGATTATTTGCAGATCAGTGTTTCAAACCCTCAGAAAGAGCATGAGGGTTCGTCTAATTCGATTGTTCCAGGGGGTAACACTTATGTGACTTATTTGATCACTACGAGGACGAATATGAGGGGATTTGCTGGTCCCGAGTTTAGTGTTAGGAGGAGGTTCAGGGATGTGGTTACGCTGGCTGATAGGTTATCGGAGTCGTATAGAGGGTTTTTCATTCCGGCTAGGCCTGATAAGAGTGTGGTGGAGAGTCAAGTCATGCACAAGCAGGACTTTGTTGAGCAAAGGAGAGTCGCCTTGGAGAAGTACTTGCGGAAATTGGCAGCTCATCCTGTGATTAGGAAAAGCGATGAGTTGAGAGTGTTTTTGCAAGTGCCTGGGAAGCTTCCTTTGCCTACGAGCACTGATGTGGCATCAAGGGTGCTTGATGGAGCCGCCAAGTTACCAAAGCAGTTGTTTGGGGACTCTAGGAGTGTCATAGCTCCTCAAGAGGCAGTCCAACCAGCGAAAGGAGGAAGAGATCTGCTGAGGCTATTCAAGGAGCTGAAACAGTCCGTGACAAATGATTGGGGAAATTCAAGGCCGCCACTTGTTGAAGAGGACAAGGAGTTTTTGGAGAAGAAAGAAAAGCTACATGATTTTGAGCTGCGTCTCACTGATGCATCTAAGCAGGCAGAGTTGCTTGTCAAAGCTCAACAAGATATGGGAGATACAATGGGAGAATTGGGGCTATCATTTATCAAGTTGACAAAATTTGAGAATGAGAAAGTGCTTCTTGACACTCAAAGAGCACGTGCTGCTGACATGAAGAACGTAGCAACAGCTACTGTCAAAGCAAGCAGAATATACAGGGAACTAAATGCAAAAACAGTAAAAGACCTGGATATTCTTCATGAGTACCTCGGGGTTATGTTAGCTGCTCGTAATGCATATTCAGATCGTGCAAGTGCTTTGTTGACGGTACAAACTCTTCTATCGGACCTATCATCACTGCAATCTAAGGCTGAAAAACTTGAGGCCGCATCATCCAAGGTCTTTGGTGGTGACAAGTCAAGGAATCAAAAATTGGAAGAGTTGGAGGAAACCCTGAGAATCACTGAGGATTCAAAGAACTGTGCAGTTAGAGAATATGAGCGAATCAAGGAAAATAACAGGAGTGAGCTTGAAAGACTCGAAAGAGAAAAACGAGCAGCTTTTTTGAACATGTTGAAGGGGTTTGTAGGTGATCAGGTAACCTGTGCTGAGAAAATGTCTAATTTGTGGTCGAAGGTTGCAGAGGATACCAGAGGATATGCAAAAGAGACTCCCACTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53019.p1 GENE.R_Transcript_53019~~R_Transcript_53019.p1 ORF type:complete len:574 (+),score=139.17,PX|PF00787.20|3.5e-21,Vps5|PF09325.6|2.4e-17 R_Transcript_53019:566-2287(+)
MMGSESQGSEEPAHNHPLAQTEEDMETLVLDDPLSSSKSSLAIYKSAISTLSESNQHQHHPLSPSVVAQPADSDPLLSYVSERDQFSPKGHDNSHFEDSDYSDLLISPNGEVNGGDSNGFNSPSSNSVTSDNALGSDYLQISVSNPQKEHEGSSNSIVPGGNTYVTYLITTRTNMRGFAGPEFSVRRRFRDVVTLADRLSESYRGFFIPARPDKSVVESQVMHKQDFVEQRRVALEKYLRKLAAHPVIRKSDELRVFLQVPGKLPLPTSTDVASRVLDGAAKLPKQLFGDSRSVIAPQEAVQPAKGGRDLLRLFKELKQSVTNDWGNSRPPLVEEDKEFLEKKEKLHDFELRLTDASKQAELLVKAQQDMGDTMGELGLSFIKLTKFENEKVLLDTQRARAADMKNVATATVKASRIYRELNAKTVKDLDILHEYLGVMLAARNAYSDRASALLTVQTLLSDLSSLQSKAEKLEAASSKVFGGDKSRNQKLEELEETLRITEDSKNCAVREYERIKENNRSELERLEREKRAAFLNMLKGFVGDQVTCAEKMSNLWSKVAEDTRGYAKETPTK*

Click here to download the sequence:
Link to NCBI Protein BLAST