Transcript Information: R_Transcript_53064.p1


Annotated TAIR IDAT4G23330.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12192136-12194745 | Forward length=270
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.532367604361
Replicate 210.679152797945
Replicate 39.6761219156161
Condition 2: 8 Hour
Replicate 111.609677345677
Replicate 29.2527786929044
Replicate 312.831310955791
Condition 3: 24 Hour
Replicate 111.083079351305
Replicate 29.5065771080075
Replicate 311.887287890298


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53064.p1 GENE.R_Transcript_53064~~R_Transcript_53064.p1 ORF type:complete len:116 (+),score=29.71 R_Transcript_53064:85-432(+)
ATGGATGGTGATGAGGATGGGAAAGAGCAAGCTTCAATGGAGAATCCATCAAAGATGAAAGAACCCATTGATCCAGACTCCAACTCCTTCAACCAAGCTGATCTCTTGAAAGCCTTGGAGGTGGTAGAGAGAGACTCCCTCGCTATTGCCGACAGCTACACCTCCCTCTTCGCTTCTCTCCGATTAGCTCTCTCCCAGGTTACTAGCACTTCTGTTGATCATATCCAATGCTTCAGTGATGCGGCAGGCAACCTTCAAGAATCCGCTGTTGATGCAGCAATGAGAGGGAATCGTTTTATACATTCATGTATTAGGTATGTGTCTGATCTTTGTGCTACATATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53064.p1 GENE.R_Transcript_53064~~R_Transcript_53064.p1 ORF type:complete len:116 (+),score=29.71 R_Transcript_53064:85-432(+)
MDGDEDGKEQASMENPSKMKEPIDPDSNSFNQADLLKALEVVERDSLAIADSYTSLFASLRLALSQVTSTSVDHIQCFSDAAGNLQESAVDAAMRGNRFIHSCIRYVSDLCATYD*

Click here to download the sequence:
Link to NCBI Protein BLAST