Transcript Information: R_Transcript_53066.p1


Annotated TAIR IDAT4G23330.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12192136-12194745 | Forward length=270
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1391831814257
Replicate 26.1154273057179
Replicate 34.6703057234874
Condition 2: 8 Hour
Replicate 15.7054442595523
Replicate 26.9470700865819
Replicate 35.6393353383726
Condition 3: 24 Hour
Replicate 18.9156532923123
Replicate 25.5673469044176
Replicate 35.7375536557886


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53066.p1 GENE.R_Transcript_53066~~R_Transcript_53066.p1 ORF type:complete len:103 (+),score=16.91 R_Transcript_53066:85-393(+)
ATGGATGGTGATGAGGATGGGAAAGAGCAAGCTTCAATGGAGAATCCATCAAAGATGAAAGAACCCATTGATCCAGACTCCAACTCCTTCAACCAAGCTGATCTCTTGAAAGCCTTGGAGGTGGTAGAGAGAGACTCCCTCGCTATTGCCGACAGCTACACCTCCCTCTTCGCTTCTCTCCGATTAGCTCTCTCCCAGGTTAACCTATTCTTTTTACTCTTGTTTTTAACTTATTGTCCGATTCATTACTGGGTATCATTTTTTGTTTTTGATTGTTTTTTGGGGGGTAGTTCTACATTGGGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53066.p1 GENE.R_Transcript_53066~~R_Transcript_53066.p1 ORF type:complete len:103 (+),score=16.91 R_Transcript_53066:85-393(+)
MDGDEDGKEQASMENPSKMKEPIDPDSNSFNQADLLKALEVVERDSLAIADSYTSLFASLRLALSQVNLFFLLLFLTYCPIHYWVSFFVFDCFLGGSSTLGF*

Click here to download the sequence:
Link to NCBI Protein BLAST