Transcript Information: R_Transcript_53083.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value7.7E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.583926016082
Replicate 223.284358794997
Replicate 329.220774241246
Condition 2: 8 Hour
Replicate 122.18377508041
Replicate 229.002254866666
Replicate 335.760224341874
Condition 3: 24 Hour
Replicate 135.074427708992
Replicate 230.113911177519
Replicate 336.479507811496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53083.p1 GENE.R_Transcript_53083~~R_Transcript_53083.p1 ORF type:complete len:468 (+),score=81.45,DUF4793|PF16041.1|1.3e-30,DUF4792|PF16040.1|2e-24,zf-C3HC4_3|PF13920.2|2.3e-13 R_Transcript_53083:427-1830(+)
ATGGAGCAATCACCACTGATTCTGTCCTCATCATCTTCGTCTTCCATCAGCGACGAAGGCCCGTCCACGTCGGCGGAAGGTCCGTCGTCGAGTTTTCCGGGAGAGGAGAGAGAAAGTGGTGGTGGCGATTTGGATGAGGCACCGGTCATCACGCGCCAGTTGACCAGCACTTCGTATCGTGTCGGATACGCGCCTCGTGCAACGTCAGTTGGGCCTGATGAGTTGCACACTGATGATACTTTGTCTTGCGTGATTGTGGTCCTCACTTTCTGGTTCTTCGTGTCTATGACTCTCATTATGGGAATCTTTGGATCAGAGGATTTACAGCTTGGACCATATAGCTCAATCCTGTTACAACCTAACCCATTATTTGTAGATTATTTAAAGATGGAAACATCAAAAGACATGAAAGCTGCTCCAGTTCTTTATGGTTTCTATAAAGCTCCTCCCCTAGATGTTGCTAAGACGTGGTCCGAGTCTCGAATTGCTTCAGTTAAACCTGAATCGCATGAGGAATGGGTTTATTACTTGAATGAGGGATCTCAAATTAAAATATCGTACAACGTGCCAAGTTCATCCCCTTTGTTGCTCATAATAGCAAAAGGGATTGAAGGAATGGCTGAATGGCTTGAGGATCCATCATATCCAGATAATGCTATGTCCTGGAATGTCATAAGGGGAAATGGCACTGTCATGCAGGATATCTCAAAGTCTTGCGATTATTATGTTGCTGTTGGCAACTTCAACTCTGAGAATGTAGAGGTGGAATTGAAGATGTCGATTAGATCTTCCATGTATGACATTACGGATTCATATTACAAGTGTGATTTGAGTCAAGGTTCATGCAGTTTGAAGGTAGCTTTTCCAGGGGGAAATGCTGCCGTGTTGACCACTGGAGCACCACAAGAGGGTGCTGAAAGTGAAAGATTGTATGTCAAGCTGTCCTTTGAACCGCGCTGGATGACATATTTTCTTGGTATAGGTGGGATGACTTCGATCATGTTATGGGCATTCAACTTCTTGAATAGGGTCAGACGTAACAATGAAGATGTAAATGAAGCTGGGGGTCTGAGATCAGAGAGAGCGGCGTTGCTTTTTCAGAAAGATGATGATCTCTCTAGCTTGGGTTCATCTTATGATTCTGGTTCACAGAATGATGAGGATTCTCAAGATTGTCTAGAAGAAGGACTTATTGAAGGGAGCTCCACTGGAGAGGGTGGAAGAAAATACAGCTCCAGGCAACTTTGTGTGATATGCTTTGATGCACCTAAAGATTGCTTCTTCATTCCTTGTGGCCATTGCGCATCATGTTATACATGTGGAACAAGGATTGCTGAGATTGCTGGTACCTGCCCCATTTGTCGCCGTAAAATGAAGAAAGTTAGAAGAATATATAATGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53083.p1 GENE.R_Transcript_53083~~R_Transcript_53083.p1 ORF type:complete len:468 (+),score=81.45,DUF4793|PF16041.1|1.3e-30,DUF4792|PF16040.1|2e-24,zf-C3HC4_3|PF13920.2|2.3e-13 R_Transcript_53083:427-1830(+)
MEQSPLILSSSSSSSISDEGPSTSAEGPSSSFPGEERESGGGDLDEAPVITRQLTSTSYRVGYAPRATSVGPDELHTDDTLSCVIVVLTFWFFVSMTLIMGIFGSEDLQLGPYSSILLQPNPLFVDYLKMETSKDMKAAPVLYGFYKAPPLDVAKTWSESRIASVKPESHEEWVYYLNEGSQIKISYNVPSSSPLLLIIAKGIEGMAEWLEDPSYPDNAMSWNVIRGNGTVMQDISKSCDYYVAVGNFNSENVEVELKMSIRSSMYDITDSYYKCDLSQGSCSLKVAFPGGNAAVLTTGAPQEGAESERLYVKLSFEPRWMTYFLGIGGMTSIMLWAFNFLNRVRRNNEDVNEAGGLRSERAALLFQKDDDLSSLGSSYDSGSQNDEDSQDCLEEGLIEGSSTGEGGRKYSSRQLCVICFDAPKDCFFIPCGHCASCYTCGTRIAEIAGTCPICRRKMKKVRRIYNV*

Click here to download the sequence:
Link to NCBI Protein BLAST