Transcript Information: R_Transcript_53084.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value7E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48352214449586
Replicate 20.2780966942556
Replicate 30.60680099592457
Condition 2: 8 Hour
Replicate 11.4594224140742
Replicate 20.14808531020653
Replicate 31.4425121022824
Condition 3: 24 Hour
Replicate 11.976499960001
Replicate 20.14606131715614
Replicate 31.8843719266865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53084.p1 GENE.R_Transcript_53084~~R_Transcript_53084.p1 ORF type:5prime_partial len:151 (+),score=24.10,DUF4792|PF16040.1|3.2e-12,DUF4792|PF16040.1|3.6e+03 R_Transcript_53084:1-453(+)
CATGAGGAATGGGTTTATTACTTGAATGAGGGATCTCAAATTAAAATATCGTACAACGTGCCAAGTTCATCCCCTTTGTTGCTCATAATAGCAAAAGGGATTGAAGGAATGGCTGAATGGCTTGAGGATCCATCATATCCAGATAATGCTATGTCCTGGAATGTCATAAGGGGAAATGGCACTGTCATGCAGGATATCTCAAAGTCTTGCGATTATTATGTTGCTGTTGGCAACTTCAACTCTGAGAATGTAGAGGTGGCTGTGCTATCAAACTGCTCGAACAGAATTTATTTTCTTTTGGGTGTTTTAAATGATCTGCTGGTGTGTCTGTTTGGCCATCAGTTTTTGAAATTGGGCACTGGTTACTTTTCTGTGATAAGTGATAACACAGACACTGTCATTCAATTTCAAAGAAGGTTCAGAAATACTATGGTTTTTAATATCTATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53084.p1 GENE.R_Transcript_53084~~R_Transcript_53084.p1 ORF type:5prime_partial len:151 (+),score=24.10,DUF4792|PF16040.1|3.2e-12,DUF4792|PF16040.1|3.6e+03 R_Transcript_53084:1-453(+)
HEEWVYYLNEGSQIKISYNVPSSSPLLLIIAKGIEGMAEWLEDPSYPDNAMSWNVIRGNGTVMQDISKSCDYYVAVGNFNSENVEVAVLSNCSNRIYFLLGVLNDLLVCLFGHQFLKLGTGYFSVISDNTDTVIQFQRRFRNTMVFNIYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST