Transcript Information: R_Transcript_53142.p1


Annotated TAIR IDAT3G55600.1
Annotated Gene NameMembrane fusion protein Use1
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20620682-20622341 | Forward length=240
E-Value1.7E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9599396142787
Replicate 22.2698703152755
Replicate 33.5082390913026
Condition 2: 8 Hour
Replicate 11.985340401128
Replicate 22.6188420174362
Replicate 31.9623362832851
Condition 3: 24 Hour
Replicate 11.8614438292733
Replicate 21.9869602604124
Replicate 31.7746787583971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53142.p1 GENE.R_Transcript_53142~~R_Transcript_53142.p1 ORF type:3prime_partial len:111 (+),score=13.90,Use1|PF09753.5|1.6e-13 R_Transcript_53142:1809-2138(+)
ATGTTTACTTGCACAACTGCCAAACTCTCATTCTCAGGCGATCAAAGTTACCTGGAAATCGAAAGCAACGAATTGAAACTTCTAGAAGAAGCATTCATCTCAATCGATCGAGATTTCGATTTGGAACAGTGGGAAGTGTTATTGATGGGAATCAGTAAAACTGAGATAAACTTGAGACGGTTACTTGCAGCTGCACCTCAACAGCAAAATCAGGCTAAATTAGTACATTATGTTGCCACTCTTCGGGAACTGTTGGAACAGTTATCGGAAGAGACCACTCCCGAAGGCTTACAATGGGTTTCCAAAGCTAAGGTGAATGATTACTCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53142.p1 GENE.R_Transcript_53142~~R_Transcript_53142.p1 ORF type:3prime_partial len:111 (+),score=13.90,Use1|PF09753.5|1.6e-13 R_Transcript_53142:1809-2138(+)
MFTCTTAKLSFSGDQSYLEIESNELKLLEEAFISIDRDFDLEQWEVLLMGISKTEINLRRLLAAAPQQQNQAKLVHYVATLRELLEQLSEETTPEGLQWVSKAKVNDYSE

Click here to download the sequence:
Link to NCBI Protein BLAST