Transcript Information: R_Transcript_53150.p1


Annotated TAIR IDAT5G54730.1
Annotated Gene NameHomolog of yeast autophagy 18 (ATG18) F
Annotated Gene Symbol(s)ATATG18F, ATG18F, G18F
Annotation TypeHomolog
Chromosome Positionchr5:22233977-22236804 | Reverse length=763
E-Value3E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.604823223226
Replicate 27.2510479344657
Replicate 311.932812143112
Condition 2: 8 Hour
Replicate 18.3707491796396
Replicate 211.050435793609
Replicate 316.01985169869
Condition 3: 24 Hour
Replicate 110.891610870818
Replicate 27.7449862615748
Replicate 310.383934316574


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53150.p1 GENE.R_Transcript_53150~~R_Transcript_53150.p1 ORF type:3prime_partial len:860 (+),score=169.87,BCAS3|PF12490.4|7.2e+03,BCAS3|PF12490.4|4.7e-76 R_Transcript_53150:188-2764(+)
ATGAGGAATGATGGGCAGAAACCTCAGGGAGCTTCGGGCCGGGCCAACGGGTTCTTGCCCAGCTCGTTTCGGGCCATTTCCAGCTACCTGAGGATTGTTTCATCTGGGGCTTCAACGGTTGCTTCTACCGTCCGGTCGGCCGCTTCATCGATTGTGGTAGACAGGGAGGATCATGCCCTCTATGACCAGGTGCTTTGGGCTGGGTTTGACAAGTTGGAAGGCGAGAGAGATGTCATACGACGGATCCTGCTATTGGGTTATCAATCTGGTTTTCAGGTGTGGGATGTGGAGGAAGCACACTATGTCCGTGACCTGGTTTCCAGATATGATGGTCCTGTTTCCTTTTTGCAAATGCTGCCGAAGCCGTTGCCAACTCTGGCATCAGGAGACAAATTTTCTGATAGTCGCCCCCTGCTGGTAGTATGTACAGATGGATCTCTTCTACATGATGGGATAAATACTCCTCACATTTCCAATTTCCATGACCCTGGGAATGGCTACTATGCTCCTTCAAATGTTCGATTTTATTCTATATCTTCCCAATCTTATGTACATGTACTGAAGTTCAGATCAGTTGTTTATTCTGTTAGGTGCAGTTCTCGGGTTGTGGCTGTTTCTCAGGCAGCTCAGGTGCACTGTTTCAATGCTGCTACTTTGGAGAAGGAATATACCATTCTCACGAATCCTGTTGTTACTGGTGGTCCTGATTCTGGAGGTATAGGTTATGGACCTCTTGCTCTTGGTCCCAGGTGGTTAGCATATAGTGGAAGTCCGATAGAGGTTTCAAATGCAGGTCGCGTCAGTCCACAGCATCTGACACCTTCAGCAACTTTTCCTAGTGCTGAGTCAAATGGTATCCGTGTGGCTCACTATGCAAAGGAGTCAAGCAAGCATCTTGCTGCAGGAATAGTGAACCTGGGGGATAAAGGATATAAAAAACTGTCTCGATATTGCTCTGAGCTGATGCCTGATTCTAATCATGCTATGCATTCTGGGGTTAACGGTGGAAAAGCCAATGGCACTATCAATGGCCATCTGCCTGGCTCAGATAATATTGGAATGGTCATTGTAAAAGATGTTGTCAGTAAGACTGTGATTACTCAGTTTAGAGCACACAAAAGCCCTATTTCCGCATTGTGCTTTGATCCTAGTGGGGTCCTACTGGTGACAGCTTCAGTTCAGGGGCATAACATCAATGTTTTCCGTATAATACCGGGAACTGGAAGCCTTGGAGATTCTTCTACATCTGGTACCAGTGGATCCTATGTCCATCTTTACAGATTGCAACGTGGTCTTACCAATGCGATAATACAAGATATTACTTTCAGTGATGACAGCTGCTGGATCATGATTAGTTCGTCTAGGGGTACCAACCATCTCTTTGCTATTTCCCCATTTGGTGGAAGTGTGGACCTTCAGTTTGTTGATACCAGTTCTAAACGTAATAGATTGAGTATTATGGGTGATCATGAGGTCCGATGGCAGCCCAAACCTACTGTTCAAATGTTTAATCAGAAGAACCTTTTCACGTCCGGTCCTCCAGTTACTCTTTCCGTGGTTAGCAGAATTAGAAATGGAAGCAACGGGTGGAGAGGTACTGTTAATGGTGCTGCAGCTGTTGCAACAGGCAACAGTAATTATGTGTCTGGTGCTGTTGCAGCTGCTTTCCACCTCTGCAAAGGCAATGATATGCATGTTAATGCCTTTGATTTGAAGTCTAAGTACCACCTGTTGGTTTTTTCTCCATCTGGCTGTTTGGTCCAGTATGCGTTGAGGGTCTCTCTTGGTGTAGACACTGTATCAACTGTTATTGGAGTAAGCCCAGCTTATGAGTCAGTTCCCGGGAATGATTCAAAGTTAATAGTCGAGGCTCTTCAAAAATGGAATATTTGTCAAAAGCGAAGGGAACGAGAAGATTACTTCGATATATATGGTGAAAATGGGAGCTCAGATTCTAGTAAATTATTTCACGAAGAGACTAGAAACGGATATGTTACTACTGCTGAGACCAAGGGTATGATCATCAGAACAAAGATGAGCCCTGAAGAAAGAAACCATTATTATATTTCTGAAGCTGAATTGCAAATGCATGAACAGCAGGTTTCACTTTGGGCAAGATCTGAGATTTACTTTCAGTCAATAATGATTGATGGCGTTAAACTAGATGGGGAAAATGCTGGAGGGGAGTTCGAGATTGAAAAAGTTCCTGCTCGTACGATTGAAGCTAGGTCCAAGGGTTTGGTTCCTGTTCATGATCATCTAGACAATGGCAAATCTCAACCGGCAAGAATCGCTGTTTCAGATAGCAAGTTTGAACCAGAGCTGCTGCCTCAGGTGTCTGGCTTCTCTCCACTTGGGAATCTTTTGACAGGCAGCAAACTTAATGCTTTTGACTTGACTGAAAATGGAGTGGAATTCCATGGTGAAACCAAGGATGGTCCATTGAATCATGCAGATATAAGTCTGGGCTCTGTAAATACTAATGACTGCCCTAAAACTATATCTGAGCTTCAGATTGTAAATGATAGAGATAGAGAGAACCTGAAAATGGAGGCCCGTCACAAGTTTGTAAATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53150.p1 GENE.R_Transcript_53150~~R_Transcript_53150.p1 ORF type:3prime_partial len:860 (+),score=169.87,BCAS3|PF12490.4|7.2e+03,BCAS3|PF12490.4|4.7e-76 R_Transcript_53150:188-2764(+)
MRNDGQKPQGASGRANGFLPSSFRAISSYLRIVSSGASTVASTVRSAASSIVVDREDHALYDQVLWAGFDKLEGERDVIRRILLLGYQSGFQVWDVEEAHYVRDLVSRYDGPVSFLQMLPKPLPTLASGDKFSDSRPLLVVCTDGSLLHDGINTPHISNFHDPGNGYYAPSNVRFYSISSQSYVHVLKFRSVVYSVRCSSRVVAVSQAAQVHCFNAATLEKEYTILTNPVVTGGPDSGGIGYGPLALGPRWLAYSGSPIEVSNAGRVSPQHLTPSATFPSAESNGIRVAHYAKESSKHLAAGIVNLGDKGYKKLSRYCSELMPDSNHAMHSGVNGGKANGTINGHLPGSDNIGMVIVKDVVSKTVITQFRAHKSPISALCFDPSGVLLVTASVQGHNINVFRIIPGTGSLGDSSTSGTSGSYVHLYRLQRGLTNAIIQDITFSDDSCWIMISSSRGTNHLFAISPFGGSVDLQFVDTSSKRNRLSIMGDHEVRWQPKPTVQMFNQKNLFTSGPPVTLSVVSRIRNGSNGWRGTVNGAAAVATGNSNYVSGAVAAAFHLCKGNDMHVNAFDLKSKYHLLVFSPSGCLVQYALRVSLGVDTVSTVIGVSPAYESVPGNDSKLIVEALQKWNICQKRREREDYFDIYGENGSSDSSKLFHEETRNGYVTTAETKGMIIRTKMSPEERNHYYISEAELQMHEQQVSLWARSEIYFQSIMIDGVKLDGENAGGEFEIEKVPARTIEARSKGLVPVHDHLDNGKSQPARIAVSDSKFEPELLPQVSGFSPLGNLLTGSKLNAFDLTENGVEFHGETKDGPLNHADISLGSVNTNDCPKTISELQIVNDRDRENLKMEARHKFVNN

Click here to download the sequence:
Link to NCBI Protein BLAST