Transcript Information: R_Transcript_53180.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.871473936591
Replicate 239.828033779369
Replicate 339.437372974819
Condition 2: 8 Hour
Replicate 144.932824336182
Replicate 248.179632008328
Replicate 344.349811515791
Condition 3: 24 Hour
Replicate 146.152292880436
Replicate 241.154658342211
Replicate 348.062691735146


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53180.p1 GENE.R_Transcript_53180~~R_Transcript_53180.p1 ORF type:5prime_partial len:97 (+),score=21.55,Dimer_Tnp_hAT|PF05699.10|1.2e-10,Dimer_Tnp_hAT|PF05699.10|7e+03 R_Transcript_53180:2-292(+)
AAAGATATTCTCGCAATTCTTGCCTCTACGGTTGCTTCCGAATCTGCTTTTAGTGCAGGTAAACGAGTATTGAATCCCAAGAGAGCTAGCCTTACTCCGGAATCAATCAAGATTTGTGTATGTAAGAAGGATTGGGATCGAGCGGAAAGACTCAATTGTGTGAGGAAGTTCAATATGCCCCTTGCAAAAAAGATGGTGGAAGCTGAAGAAGAAGCGACCGAGGAGGATGATGAATTGTGGATGATGATGGATGCATCAGATACCGAATTTGAGTTGGCAAGTGATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53180.p1 GENE.R_Transcript_53180~~R_Transcript_53180.p1 ORF type:5prime_partial len:97 (+),score=21.55,Dimer_Tnp_hAT|PF05699.10|1.2e-10,Dimer_Tnp_hAT|PF05699.10|7e+03 R_Transcript_53180:2-292(+)
KDILAILASTVASESAFSAGKRVLNPKRASLTPESIKICVCKKDWDRAERLNCVRKFNMPLAKKMVEAEEEATEEDDELWMMMDASDTEFELASDA*

Click here to download the sequence:
Link to NCBI Protein BLAST