Transcript Information: R_Transcript_53201.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.12056177682185
Condition 2: 8 Hour
Replicate 10.064436486703277
Replicate 20.11768885179571
Replicate 30.047767396369439
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17279766858077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53201.p2 GENE.R_Transcript_53201~~R_Transcript_53201.p2 ORF type:complete len:380 (-),score=49.82,Retrotrans_gag|PF03732.13|9.9e-19 R_Transcript_53201:2873-3934(-)
ATGGCAGATCAACCACCACAACGCACATTGAGAGACTATGTGTCGCCGCAATCACAAAATGTGGGTTTGAGCATTCTACGACCCAATATTCAAGCCACGAACTTCGAGTTGAAGCCTGCTCTTATTCGAATGGTGCAACAGAGCCAATTCTCGGGGTTTCTGAATGAAGATCCCAACCTTCATTTAGGAGTTTTCCTCGAATACTGCGACACCATTAAGCAAGAGGGGGTGACACAAGATGACATTAGGCGATGGTTGTTTTCATTCTCTTTGAGTGGAAAAGCAAGGTCATGGCTACAATCCTTTCCATGTGACTCTCTCAAAACATGGGAAGAGTTATGTCAAGCATTTCTATCCAAATACTTCCCACCATACAAGGCAGATGAGTTACGAGGTCAAATTCAAAACTTTGCTCAAAAAGACGGGGAATCATTTTATGAAGCATGGGAGAGATACAAAGAACTCCAACGGATGTGCCCACACCATGGTCTTGAGAAATGGCTCATTGTGCACTCCTTCTATAAAGGGCTCTTTCCCAACACCAGGATGAATGTAGATGCACATGCCGGAGGTGGAATCATGAACAAGCCATTAGATGAAGTACTTCAACTTTTTGAAGAGATTTCTCAAAATTATGGCATGTTTACAAATGAGCGAGCTCCGAAAAAGGTAACCTCTGGTAAGCATGAAATTGATGTCATTGATCATTTAACTTCCAAAGTTGATGCTTTATTTAGTAGACTTGATAAGATGACTATTAATGCATGCAATTCATCCAATGCTCATTGTGAAATTTGTGATGTTGATGGACATGATGCATCTTCATGCCAAATGAACCCCCCCTCTACTCTTGAAACTTGCATGGAACAAGTGAACTATGTCAACAACTATGCCCTAGGAATGACCCCTTCTCAAATACCTATAATCCAGGTTGGAAGAATCATCCAAACCTCTCTTATAGGAACCCCACTCAAAACCAAGCCCCACAAAGACCGCCAGGTTTTTATGCCCCTAGGAATTCCAATCCACAGTCCATGCCTCCTCCACAAAAGAATGATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53201.p2 GENE.R_Transcript_53201~~R_Transcript_53201.p2 ORF type:complete len:380 (-),score=49.82,Retrotrans_gag|PF03732.13|9.9e-19 R_Transcript_53201:2873-3934(-)
MADQPPQRTLRDYVSPQSQNVGLSILRPNIQATNFELKPALIRMVQQSQFSGFLNEDPNLHLGVFLEYCDTIKQEGVTQDDIRRWLFSFSLSGKARSWLQSFPCDSLKTWEELCQAFLSKYFPPYKADELRGQIQNFAQKDGESFYEAWERYKELQRMCPHHGLEKWLIVHSFYKGLFPNTRMNVDAHAGGGIMNKPLDEVLQLFEEISQNYGMFTNERAPKKVTSGKHEIDVIDHLTSKVDALFSRLDKMTINACNSSNAHCEICDVDGHDASSCQMNPPSTLETCMEQVNYVNNYALGMTPSQIPIIQVGRIIQTSLIGTPLKTKPHKDRQVFMPLGIPIHSPCLLHKRMI*

Click here to download the sequence:
Link to NCBI Protein BLAST