Transcript Information: R_Transcript_53222.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value7E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3917672975149
Replicate 21.4480207183654
Replicate 31.7377525072943
Condition 2: 8 Hour
Replicate 13.0396246141408
Replicate 22.6216206296562
Replicate 33.1295880379977
Condition 3: 24 Hour
Replicate 12.2166158702611
Replicate 24.1068413106592
Replicate 31.5094968749584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53222.p1 GENE.R_Transcript_53222~~R_Transcript_53222.p1 ORF type:internal len:145 (-),score=24.59 R_Transcript_53222:2-433(-)
AAACTTTGCCTTTGCGGATGGGATCCCGCTATTATCAGCTCCAAGATACCTGCCATTTTTTCCTTGCTATTGAAGAGAGGTAATTCTGACGTTGGGGTGAACCGGCTAAGAAAATTGCTCGATACTGACAAATTGATATTCAAGGCAGAGAATCTTGATGAGATCAACAATCAGGGTGGAATGTATGTTTTAATAACTGTGGAACCTGAGGGAGTTGTTGCAATACCTGGAGTCCAAGAAAGAGAGAGTATCTTGTTCAATATAGTTTGTGATGAGCTGATACTGGGTATCCCTCACAAAGCTTGGCTGGTTGCATTCCTGGCTTTGGTATGTGTAATATTGGGATTCCTTGTGCCTCAATTTCTTCCTCCATTGCTTCTGCCGAAGGGCCAAGACCTCAAGTCAATTGATCATATGGTTGCAAATAAGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53222.p1 GENE.R_Transcript_53222~~R_Transcript_53222.p1 ORF type:internal len:145 (-),score=24.59 R_Transcript_53222:2-433(-)
KLCLCGWDPAIISSKIPAIFSLLLKRGNSDVGVNRLRKLLDTDKLIFKAENLDEINNQGGMYVLITVEPEGVVAIPGVQERESILFNIVCDELILGIPHKAWLVAFLALVCVILGFLVPQFLPPLLLPKGQDLKSIDHMVANKN

Click here to download the sequence:
Link to NCBI Protein BLAST